RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ARF3P61204 181 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 ARF1P84077 181 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 SHROOM1Q2M3G4 852 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 ANKDD1AQ495B1 522 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 MPRIPQ6WCQ1 1025 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 TTLL7Q6ZT98 887 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 CEP97Q8IW35 865 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 CHST14Q8NCH0 376 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 NSUN4Q96CB9 384 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 OBP2BQ9NPH6 170 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 C2orf81A6NN90 581 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 LGALS16A8MUM7 142 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 AQP7O14520 342 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 PLATP00750 562 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 HARSP12081 509 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 GRM5P41594 1212 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 AFF3P51826 1226 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 NLRP5P59047 1200 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 MAP4K2Q12851 820 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 TIGD6Q17RP2 521 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 UAP1L1Q3KQV9 507 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 RAB12Q6IQ22 244 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 KDELC1Q6UW63 502 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 IL27RAQ6UWB1 636 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 ZNF783Q6ZMS7 281 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 MAEAQ7L5Y9 396 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 MOGAT3Q86VF5 341 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 TGFBRAP1Q8WUH2 860 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 ZUFSPQ96AP4 578 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 AIDAQ96BJ3 306 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 APIPQ96GX9 242 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 ALPK1Q96QP1 1244 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 PRDM6Q9NQX0 595 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 KLHL3Q9UH77 587 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 LAMP5Q9UJQ1 280 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 RPS6KA6Q9UK32 745 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 COQ6Q9Y2Z9 468 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 PCDHA8Q9Y5H6 950 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 WRNQ14191 1432 aaPredicted RBP eCLIP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 VGLL3A8MV65 326 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 TRIM38O00635 465 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 TLL1O43897 1013 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SRGAP2O75044 1071 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 PTP4A3O75365 173 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 KIAA0754O94854 1291 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SCG2P13521 617 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 PLCG1P19174 1290 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 AGXTP21549 392 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CTSSP25774 331 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ARNTP27540 789 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MSH2P43246 934 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MYBPC3Q14896 1274 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MUM1Q2TAK8 710 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 UBXN11Q5T124 520 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 LRCH2Q5VUJ6 765 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CREB3L3Q68CJ9 461 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 LIN54Q6MZP7 749 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 RNF168Q8IYW5 571 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CCDC116Q8IYX3 515 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 RNF152Q8N8N0 203 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 KDF1Q8NAX2 398 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 IPMKQ8NFU5 416 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ACSF2Q96CM8 615 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ZC3H10Q96K80 434 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 DHRS1Q96LJ7 313 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MBIPQ9NS73 344 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 OXSMQ9NWU1 459 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ZDHHC3Q9NYG2 299 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CEP83Q9Y592 693 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 PTPDC1A2A3K4 754 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 BTBD11A6QL63 1104 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SYT5O00445 386 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 NOP56O00567 594 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 NPC1O15118 1278 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 PLA2G6O60733 806 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ADH1BP00325 375 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 PSAPP07602 524 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 BTF3P20290 206 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SERPINF1P36955 418 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MECP2P51608 486 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ALDH3A2P51648 485 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 GFRA1P56159 465 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SNX17Q15036 470 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 TSTQ16762 297 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 SLC35G1Q2M3R5 365 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 STYK1Q6J9G0 422 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ADAMTSL4Q6UY14 1074 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ZER1Q7Z7L7 766 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 UNC45BQ8IWX7 931 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 EFHBQ8N7U6 833 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 TTLL11Q8NHH1 800 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 MOSPD2Q8NHP6 518 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 ASAP3Q8TDY4 903 aa5.82□□□□□ -1.48
ECHDC1-222ENST00000531967 CREB3L4Q8TEY5 395 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms