RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 GLP2RO95838 553 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 VTNP04004 478 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 KRT2P35908 639 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 NRIP1P48552 1158 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 NR5A1Q13285 461 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 ZNF746Q6NUN9 644 aaPredicted RBP20.14■□□□□ 0.81
PTPN11-204ENST00000531326 SLC24A5Q71RS6 500 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 TRMT1LQ7Z2T5 733 aaKnown RBP20.14■□□□□ 0.81
PTPN11-204ENST00000531326 FAM228AQ86W67 206 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
PTPN11-204ENST00000531326 BBXQ8WY36 941 aaPredicted RBP20.14■□□□□ 0.81
PTPN11-204ENST00000531326 PPP2R3CQ969Q6 453 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 FOXD4L1Q9NU39 408 aa20.14■□□□□ 0.81
PTPN11-204ENST00000531326 TBKBP1A7MCY6 615 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 CRYBB1P53674 252 aaPredicted RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 SETQ01105 290 aaPredicted RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 EARS2Q5JPH6 523 aaKnown RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 FAM43BQ6ZT52 329 aaPredicted RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 RBM23Q86U06 439 aaKnown RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 CKAP2LQ8IYA6 745 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 LENG9Q96B70 501 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 POP1Q99575 1024 aaKnown RBP20.13■□□□□ 0.81
PTPN11-204ENST00000531326 BRMS1Q9HCU9 246 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 MUTYHQ9UIF7 546 aa20.13■□□□□ 0.81
PTPN11-204ENST00000531326 GPR182O15218 404 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 CIITAP33076 1130 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 FAM189BP81408 668 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 DSC3Q14574 896 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 PRR16Q569H4 304 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 RNF135Q8IUD6 432 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 SMAP1Q8IYB5 467 aaPredicted RBP20.12■□□□□ 0.81
PTPN11-204ENST00000531326 METTL13Q8N6R0 699 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 SMRP1Q8NCR6 262 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 TYW1Q9NV66 732 aaKnown RBP20.12■□□□□ 0.81
PTPN11-204ENST00000531326 GABBR1Q9UBS5 961 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 BARX2Q9UMQ3 279 aaPredicted RBP20.12■□□□□ 0.81
PTPN11-204ENST00000531326 PCDHA10Q9Y5I2 948 aa20.12■□□□□ 0.81
PTPN11-204ENST00000531326 FAM205CA6NFA0 338 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 PSAPP07602 524 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 FGFR1P11362 822 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 CLCN3P51790 818 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 RBM10P98175 930 aaKnown RBP20.11■□□□□ 0.81
PTPN11-204ENST00000531326 COASYQ13057 564 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 NONOQ15233 471 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTPN11-204ENST00000531326 HERC4Q5GLZ8 1057 aaPredicted RBP20.11■□□□□ 0.81
PTPN11-204ENST00000531326 ODR4Q5SWX8 454 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
PTPN11-204ENST00000531326 LINC01465Q8N7H1 131 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 TBCKQ8TEA7 893 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 CWH43Q9H720 699 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 TMEM161AQ9NX61 479 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 PCDHB12Q9Y5F1 795 aa20.11■□□□□ 0.81
PTPN11-204ENST00000531326 CCDC194A0A1B0GVG4 234 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 ZNF862O60290 1169 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 FGF18O76093 207 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 ERVFC1P60507 584 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 UBE3AQ05086 875 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 SAFBQ15424 915 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTPN11-204ENST00000531326 INF2Q27J81 1249 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 LARP1BQ659C4 914 aaKnown RBP20.1■□□□□ 0.81
PTPN11-204ENST00000531326 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 HFE2Q6ZVN8 426 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 COLGALT1Q8NBJ5 622 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 VN1R2Q8NFZ6 395 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 TLR9Q9NR96 1032 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 TECTAO75443 2155 aa20.1■□□□□ 0.81
PTPN11-204ENST00000531326 ZNF318Q5VUA4 2279 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 PER2O15055 1255 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 USP11P51784 963 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 LRRC71Q8N4P6 559 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 ADAMTS10Q9H324 1103 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 FOXP1Q9H334 677 aaPredicted RBP20.09■□□□□ 0.81
PTPN11-204ENST00000531326 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
PTPN11-204ENST00000531326 TLE6Q9H808 572 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 ATP6V0A4Q9HBG4 840 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 AAASQ9NRG9 546 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 RNF19AQ9NV58 838 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 RNF216Q9NWF9 866 aaPredicted RBP20.09■□□□□ 0.81
PTPN11-204ENST00000531326 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
PTPN11-204ENST00000531326 FSCN2O14926 492 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 NLRP11P59045 1033 aaKnown RBP20.08■□□□□ 0.81
PTPN11-204ENST00000531326 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 LRRC55Q6ZSA7 311 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 THNSL1Q8IYQ7 743 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 MICAL1Q8TDZ2 1067 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 USP15Q9Y4E8 981 aaPredicted RBP20.08■□□□□ 0.81
PTPN11-204ENST00000531326 SAMM50Q9Y512 469 aa20.08■□□□□ 0.81
PTPN11-204ENST00000531326 WDR64B1ANS9 1081 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 LOC730098B7Z3J9 87 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 H3BQV1 296 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 MSH4O15457 936 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 MAGEB2O15479 319 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 U2AF2P26368 475 aaKnown RBP eCLIP20.07■□□□□ 0.8
PTPN11-204ENST00000531326 UGCGQ16739 394 aa20.07■□□□□ 0.8
PTPN11-204ENST00000531326 DUSP6Q16828 381 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms