RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 FANCMQ8IYD8 2048 aa10.46□□□□□ -0.74
CHMP4A-205ENST00000531158 DOCK6Q96HP0 2047 aa10.46□□□□□ -0.74
CHMP4A-205ENST00000531158 EP300Q09472 2414 aaPredicted RBP10.46□□□□□ -0.74
CHMP4A-205ENST00000531158 CHD8Q9HCK8 2581 aa10.46□□□□□ -0.74
CHMP4A-205ENST00000531158 NCOR2Q9Y618 2525 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 TDRD15B5MCY1 1934 aaKnown RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 BACH1O14867 736 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 BRD1O95696 1058 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 LAG3P18627 525 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 CDC27P30260 824 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ADCY7P51828 1080 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 CRYBB1P53674 252 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 PUM1Q14671 1186 aaKnown RBP eCLIP10.45□□□□□ -0.742e-7■□□□□ 9.2
CHMP4A-205ENST00000531158 ZNF484Q5JVG2 852 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 PDXDC2PQ6P474 469 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 KCNT2Q6UVM3 1135 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 NIPA1Q7RTP0 329 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 TMEM173Q86WV6 379 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 LENG9Q96B70 501 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF668Q96K58 619 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ESYT1Q9BSJ8 1104 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ADAMTS10Q9H324 1103 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 POMKQ9H5K3 350 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ELAC1Q9H777 363 aaKnown RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 ATP6V0A4Q9HBG4 840 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 V9GY48 417 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 PKD1L2Q7Z442 2459 aa10.45□□□□□ -0.74
CHMP4A-205ENST00000531158 C2orf71A6NGG8 1288 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 C2CD4DB7Z1M9 353 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 IPO5O00410 1097 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 GPR182O15218 404 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF862O60290 1169 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 FOSP01100 380 aaPredicted RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 WEE2P0C1S8 567 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 CLCN3P51790 818 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 JAKMIP3Q5VZ66 844 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 FAM160B1Q5W0V3 765 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 TRMT1LQ7Z2T5 733 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 SKAP1Q86WV1 359 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 PLA2G4DQ86XP0 818 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 TMEM105Q8N8V8 129 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 TNPO1Q92973 898 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 RIPOR3Q96MK2 946 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 TMEM117Q9H0C3 514 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 ENTPD7Q9NQZ7 604 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 AAASQ9NRG9 546 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 RALYQ9UKM9 306 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 HCFC2Q9Y5Z7 792 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 CFAP47Q6ZTR5 3102 aa10.44□□□□□ -0.74
CHMP4A-205ENST00000531158 CYP3A4P08684 503 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 FGFR4P22455 802 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 NLRP11P59045 1033 aaKnown RBP10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 DRP2Q13474 957 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 UGCGQ16739 394 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 RTN1Q16799 776 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 MIS18BP1Q6P0N0 1132 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 ECHDC2Q86YB7 292 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 KIAA2013Q8IYS2 634 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 RASEFQ8IZ41 740 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 SLC39A11Q8N1S5 342 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 LRRC43Q8N309 656 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 LRRC71Q8N4P6 559 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 KREMEN2Q8NCW0 462 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 BCL7CQ8WUZ0 217 aaPredicted RBP10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 CEP250Q9BV73 2442 aa10.43□□□□□ -0.74
CHMP4A-205ENST00000531158 FSD2A1L4K1 749 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 MEIS3P2A8K0S8 358 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 NT5C1B-RDH14C9J2C7 533 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 B4GALT3O60512 393 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 CLASP2O75122 1294 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 CSDE1O75534 798 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 ASGR2P07307 311 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 GPC3P51654 580 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF746Q6NUN9 644 aaPredicted RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 FAM43BQ6ZT52 329 aaPredicted RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 TEX2Q8IWB9 1127 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 METTL13Q8N6R0 699 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 C12orf76Q8N812 135 aaPredicted RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 KCNG4Q8TDN1 519 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 AUTS2Q8WXX7 1259 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF558Q96NG5 402 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 ZNF577Q9BSK1 485 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 VN1R3Q9BXE9 311 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 ADAM7Q9H2U9 754 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 NGRNQ9NPE2 291 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 RBM28Q9NW13 759 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 GABBR1Q9UBS5 961 aa10.42□□□□□ -0.74
CHMP4A-205ENST00000531158 OTOGLQ3ZCN5 2332 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms