RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 FAM189BP81408 668 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 NAALADL2Q58DX5 795 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 ANO5Q75V66 913 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 LINC01599Q8WXQ3 324 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 CLP1Q92989 425 aaKnown RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 MRPL38Q96DV4 380 aaKnown RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 C11orf84Q9BUA3 381 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 PLVAPQ9BX97 442 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 COL25A1Q9BXS0 654 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 FOXP1Q9H334 677 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 TTC12Q9H892 705 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CAPN1-221ENST00000531068 MTMR6Q9Y217 621 aa12.29□□□□□ -0.44
CAPN1-221ENST00000531068 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 C9IYK1 514 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 RBAK-RBAKDNI3L0D1 243 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 HOXA2O43364 376 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 GAS2O43903 313 aaKnown RBP12.28□□□□□ -0.44
CAPN1-221ENST00000531068 CTNNB1P35222 781 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 RFC5P40937 340 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 POLGP54098 1239 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-221ENST00000531068 GUCY1B3Q02153 619 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 ORC2Q13416 577 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-221ENST00000531068 ZNF410Q86VK4 478 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 FAM228AQ86W67 206 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 TPH2Q8IWU9 490 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 NEK9Q8TD19 979 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 HLA-CQ95604 372 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 CEP89Q96ST8 783 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 LXNQ9BS40 222 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 LMAN2LQ9H0V9 348 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
CAPN1-221ENST00000531068 ATP6V0A4Q9HBG4 840 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 CHST12Q9NRB3 414 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 RGL1Q9NZL6 768 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 A0A0C4DFX4 3053 aa12.28□□□□□ -0.44
CAPN1-221ENST00000531068 SCN5AQ14524 2016 aa12.27□□□□□ -0.44
CAPN1-221ENST00000531068 ASAP2O43150 1006 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 MGEA5O60502 916 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 SLITRK3O94933 977 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 LYPLA2O95372 231 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 XRCC6P12956 609 aaKnown RBP eCLIP12.27□□□□□ -0.45
CAPN1-221ENST00000531068 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
CAPN1-221ENST00000531068 TXKP42681 527 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 SPIRE1Q08AE8 756 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 DSC3Q14574 896 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 RHPN2Q8IUC4 686 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 TET1Q8NFU7 2136 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 P2RX5Q93086 422 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 DYDC2Q96IM9 177 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 MTMR9Q96QG7 549 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
CAPN1-221ENST00000531068 SH2D3AQ9BRG2 576 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 NOL7Q9UMY1 257 aaKnown RBP12.27□□□□□ -0.45
CAPN1-221ENST00000531068 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.45
CAPN1-221ENST00000531068 TMEM150BA6NC51 233 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 NCK2O43639 380 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 STX6O43752 255 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 EOMESO95936 686 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 SKIP12755 728 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 IBSPP21815 317 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 SFPQP23246 707 aaKnown RBP eCLIP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 MCM7P33993 719 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 TRAPPC10P48553 1259 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 NPEPPSP55786 919 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 CYP4A11Q02928 519 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 DRP2Q13474 957 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 CTTNQ14247 550 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 XKR9Q5GH70 373 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 PLA2G4FQ68DD2 849 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 NOSTRINQ8IVI9 506 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 ERMNQ8TAM6 284 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 TCP11Q8WWU5 503 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 PSPC1Q8WXF1 523 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 ZNF668Q96K58 619 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 CCDC43Q96MW1 224 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 ANKEF1Q9NU02 776 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 PCDHB12Q9Y5F1 795 aa12.26□□□□□ -0.45
CAPN1-221ENST00000531068 MRPL42Q9Y6G3 142 aaKnown RBP12.26□□□□□ -0.45
CAPN1-221ENST00000531068 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-221ENST00000531068 A0A087WZ62 844 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 A0A0U1RQF3 1178 aa12.25□□□□□ -0.45
CAPN1-221ENST00000531068 TBKBP1A7MCY6 615 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms