RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 PI4KAP1Q8N8J0 262 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 USP33Q8TEY7 942 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 STAMQ92783 540 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PHKBQ93100 1093 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 HSPBAP1Q96EW2 488 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 OSBPL10Q9BXB5 764 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 TLE6Q9H808 572 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PAG1Q9NWQ8 432 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 CLIC5Q9NZA1 410 aa8.39□□□□□ -1.07
PTPRK-219ENST00000531050 PACSIN2Q9UNF0 486 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 FAM32AQ9Y421 112 aaKnown RBP8.39□□□□□ -1.07
PTPRK-219ENST00000531050 SMIM31A0A1B0GVY4 71 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 A0A1W2PQJ5 194 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 TLDC2A0PJX2 215 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 WNT7AO00755 349 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 CAPN9O14815 690 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 SPTLC1O15269 473 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 RNASEH1O60930 286 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 EEF1GP26641 437 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 SERPINB8P50452 374 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 NSUN2Q08J23 767 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 DCTN2Q13561 401 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 ACVR2BQ13705 512 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 PDCD4Q53EL6 469 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 LRRC8BQ6P9F7 803 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 Q6ZNX1 250 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 SATL1Q86VE3 508 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 ST13P4Q8IZP2 240 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 EIF2AQ9BY44 585 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 BLZF1Q9H2G9 400 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 EXOC1Q9NV70 894 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 KLHL14Q9P2G3 628 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 RASAL2Q9UJF2 1139 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 DBNLQ9UJU6 430 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 PLAGL2Q9UPG8 496 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 XDHP47989 1333 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 MRC1P22897 1456 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 CCDC169A6NNP5 214 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 BTBD18B2RXH4 712 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 TRAFD1O14545 582 aaPredicted RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 VILLO15195 856 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 EYA4O95677 639 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 RGS2P41220 211 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 SLC1A4P43007 532 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 PMS1P54277 932 aaKnown RBP8.38□□□□□ -1.07
PTPRK-219ENST00000531050 RHBDL3P58872 404 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 ITGA9Q13797 1035 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 DSTYKQ6XUX3 929 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 HS2ST1Q7LGA3 356 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 C2CD5Q86YS7 1000 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 ERP27Q96DN0 273 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 KAZALD1Q96I82 304 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 EPB41L1Q9H4G0 881 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 FADS3Q9Y5Q0 445 aa8.38□□□□□ -1.07
PTPRK-219ENST00000531050 PDE5AO76074 875 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 MARK3P27448 753 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PMS2P54278 862 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 ARPC4P59998 168 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 EHHADHQ08426 723 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 KIF22Q14807 665 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 ASTE1Q2TB18 679 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 ACSBG2Q5FVE4 666 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 FIGNQ5HY92 759 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 UBAP2Q5T6F2 1119 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 NELFCDQ8IXH7 590 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 ZBED8Q8IZ13 594 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PPFIBP2Q8ND30 876 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 MGARPQ8TDB4 240 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 LBHD1Q9BQE6 289 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 DDX47Q9H0S4 455 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 METTL14Q9HCE5 456 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 TIMMDC1Q9NPL8 285 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 AIPL1Q9NZN9 384 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 CHKBQ9Y259 395 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 GDAQ9Y2T3 454 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 UMODL1Q5DID0 1318 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 SOS2Q07890 1332 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 RANBP6O60518 1105 aaKnown RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PSMG1O95456 288 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 OXSR1O95747 527 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PIM1P11309 404 aaPredicted RBP8.37□□□□□ -1.07
PTPRK-219ENST00000531050 PRCPP42785 496 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 RXRGP48443 463 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 VPS41P49754 854 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 CCR3P51677 355 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 RELAQ04206 551 aa8.37□□□□□ -1.07
PTPRK-219ENST00000531050 B3GNT6Q6ZMB0 384 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms