RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 PSPC1Q8WXF1 523 aaKnown RBP18.78■□□□□ 0.6
SF3B2-211ENST00000531041 KIFAP3Q92845 792 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 TIGD1Q96MW7 591 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 NOC4LQ9BVI4 516 aaKnown RBP18.78■□□□□ 0.6
SF3B2-211ENST00000531041 TMEM39AQ9NV64 488 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 SUCLA2Q9P2R7 463 aaPredicted RBP18.78■□□□□ 0.6
SF3B2-211ENST00000531041 AKT3Q9Y243 479 aa18.78■□□□□ 0.6
SF3B2-211ENST00000531041 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 ASAP2O43150 1006 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 CKBP12277 381 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 THPOP40225 353 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 CDC42EP1Q00587 391 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 GIT2Q14161 759 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 MXD4Q14582 209 aaPredicted RBP18.77■□□□□ 0.6
SF3B2-211ENST00000531041 KANK3Q6NY19 840 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 CNNM4Q6P4Q7 775 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 PRPF31Q8WWY3 499 aaKnown RBP18.77■□□□□ 0.6
SF3B2-211ENST00000531041 DDX12PQ92771 950 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 STAMQ92783 540 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 PAGE5Q96GU1 130 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 DRC1Q96MC2 740 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 REEP2Q9BRK0 252 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 HIPK3Q9H422 1215 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 GPRC5CQ9NQ84 441 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
SF3B2-211ENST00000531041 NPHP3-ACAD11A0A0J9YXS1 232 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 EVI5O60447 810 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 HIP1RO75146 1068 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 VTNP04004 478 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 MRPS6P82932 125 aaKnown RBP18.76■□□□□ 0.59
SF3B2-211ENST00000531041 MAPK7Q13164 816 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 FAM26DQ5JW98 314 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 FAM102BQ5T8I3 360 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 SH3RF1Q7Z6J0 888 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 DAW1Q8N136 415 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 DNAJC19Q96DA6 116 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 CCDC34Q96HJ3 373 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 C7orf25Q9BPX7 421 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 TRIM9Q9C026 710 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 POLR3FQ9H1D9 316 aaPredicted RBP18.76■□□□□ 0.59
SF3B2-211ENST00000531041 C17orf75Q9HAS0 396 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 COL4A3BPQ9Y5P4 624 aa18.76■□□□□ 0.59
SF3B2-211ENST00000531041 KINO60870 393 aaKnown RBP18.75■□□□□ 0.59
SF3B2-211ENST00000531041 KRT18P05783 430 aaKnown RBP18.75■□□□□ 0.59
SF3B2-211ENST00000531041 MYL1P05976 194 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 AFMP43652 599 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 LAMTOR4Q0VGL1 99 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 ZNF618Q5T7W0 954 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 DYMQ7RTS9 669 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 RHPN2Q8IUC4 686 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 C7orf61Q8IZ16 206 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 DPF3Q92784 378 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 DACT1Q9NYF0 836 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 TET1Q8NFU7 2136 aa18.75■□□□□ 0.59
SF3B2-211ENST00000531041 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 M0QZ92 97 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 GPR32O75388 356 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 CHRNA1P02708 482 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 GLRA2P23416 452 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 GPC3P51654 580 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 ZNF131P52739 623 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 NLRP11P59045 1033 aaKnown RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 MGAT3Q09327 533 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 TMEM62Q0P6H9 643 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 PPP2R5AQ15172 486 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 ASAP3Q8TDY4 903 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 CELF4Q9BZC1 486 aaKnown RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 POLD4Q9HCU8 107 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 PRDM5Q9NQX1 630 aaPredicted RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 CDY2AQ9Y6F7 541 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 RSPH10B2B2RC85 870 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 TIMP1P01033 207 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 RSPH10BP0C881 870 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 SELPP16109 830 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 MDM2Q00987 491 aaPredicted RBP18.74■□□□□ 0.59
SF3B2-211ENST00000531041 POU5F1BQ06416 359 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 TRAF7Q6Q0C0 670 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 LRRC8DQ7L1W4 858 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 ZNF410Q86VK4 478 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 KSR1Q8IVT5 923 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 GRAMD1CQ8IYS0 662 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 IFT74Q96LB3 600 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 PPP1R12CQ9BZL4 782 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 ADAMTS10Q9H324 1103 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 PRKAG2Q9UGJ0 569 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 TRPV2Q9Y5S1 764 aa18.74■□□□□ 0.59
SF3B2-211ENST00000531041 UMODL1Q5DID0 1318 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 FRMD3A2A2Y4 597 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 SFI1A8K8P3 1242 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 GTPBP6O43824 516 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 FAM13AO94988 1023 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 PARNO95453 639 aaKnown RBP18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CTSHP09668 335 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 IQCF3P0C7M6 154 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 RAG1P15918 1043 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 CYP2C18P33260 490 aa18.73■□□□□ 0.59
SF3B2-211ENST00000531041 NAMPTP43490 491 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms