RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 CELF4Q9BZC1 486 aaKnown RBP17.02■□□□□ 0.32
CCS-206ENST00000530961 BHMT2Q9H2M3 363 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 ATP6V0A4Q9HBG4 840 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
CCS-206ENST00000530961 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 TRPV2Q9Y5S1 764 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 CXCL10P02778 98 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 MGAT3Q09327 533 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
CCS-206ENST00000530961 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
CCS-206ENST00000530961 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 FAM43BQ6ZT52 329 aaPredicted RBP17.01■□□□□ 0.31
CCS-206ENST00000530961 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 MTRQ99707 1265 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 CDY2AQ9Y6F7 541 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 BDP1A6H8Y1 2624 aa17.01■□□□□ 0.31
CCS-206ENST00000530961 E9PMD0 336 aa17■□□□□ 0.31
CCS-206ENST00000530961 ASAP2O43150 1006 aa17■□□□□ 0.31
CCS-206ENST00000530961 NBNO60934 754 aa17■□□□□ 0.31
CCS-206ENST00000530961 VTNP04004 478 aa17■□□□□ 0.31
CCS-206ENST00000530961 CYP11B2P19099 503 aa17■□□□□ 0.31
CCS-206ENST00000530961 CRYBB1P53674 252 aaPredicted RBP17■□□□□ 0.31
CCS-206ENST00000530961 TMEM62Q0P6H9 643 aa17■□□□□ 0.31
CCS-206ENST00000530961 GPNMBQ14956 572 aa17■□□□□ 0.31
CCS-206ENST00000530961 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
CCS-206ENST00000530961 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
CCS-206ENST00000530961 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
CCS-206ENST00000530961 USP49Q70CQ1 688 aa17■□□□□ 0.31
CCS-206ENST00000530961 SYT2Q8N9I0 419 aaPredicted RBP17■□□□□ 0.31
CCS-206ENST00000530961 PSPC1Q8WXF1 523 aaKnown RBP17■□□□□ 0.31
CCS-206ENST00000530961 PLIN2Q99541 437 aa17■□□□□ 0.31
CCS-206ENST00000530961 NCOR1O75376 2440 aa17■□□□□ 0.31
CCS-206ENST00000530961 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
CCS-206ENST00000530961 GPR32O75388 356 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 PLCG1P19174 1290 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 NLRP11P59045 1033 aaKnown RBP16.99■□□□□ 0.31
CCS-206ENST00000530961 DRP2Q13474 957 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 MXD4Q14582 209 aaPredicted RBP16.99■□□□□ 0.31
CCS-206ENST00000530961 MBTPS1Q14703 1052 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 ALYREFQ86V81 257 aaKnown RBP16.99■□□□□ 0.31
CCS-206ENST00000530961 ZNF410Q86VK4 478 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 PRPF31Q8WWY3 499 aaKnown RBP16.99■□□□□ 0.31
CCS-206ENST00000530961 TMEM143Q96AN5 459 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 ADAMTS10Q9H324 1103 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 XPNPEP1Q9NQW7 623 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 KCND2Q9NZV8 630 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
CCS-206ENST00000530961 FGBP02675 491 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 PLA2G4BP0C869 781 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ACRP10323 421 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ACTN1P12814 892 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ARL2P36404 184 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 GPC3P51654 580 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 EPHB4P54760 987 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 PLEKHG4Q58EX7 1191 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 FBXO47Q5MNV8 452 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 C16orf59Q7L2K0 433 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 RHPN2Q8IUC4 686 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ADAMTS19Q8TE59 1207 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
CCS-206ENST00000530961 SEPT8Q92599 483 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 UHRF1Q96T88 793 aaPredicted RBP16.98■□□□□ 0.31
CCS-206ENST00000530961 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 FAM13BQ9NYF5 915 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 COL4A3BPQ9Y5P4 624 aa16.98■□□□□ 0.31
CCS-206ENST00000530961 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
CCS-206ENST00000530961 CMA1P23946 247 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 SLC12A3P55017 1021 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 POU5F1BQ06416 359 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 LAMTOR4Q0VGL1 99 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 TFDP1Q14186 410 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 LPIN1Q14693 890 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 TMEM240Q5SV17 173 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 RINT1Q6NUQ1 792 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 CNKSR3Q6P9H4 555 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 TSHZ1Q6ZSZ6 1077 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 C1orf186Q6ZWK4 172 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 ZNF365Q70YC5 407 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 NLRP7Q8WX94 980 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 RAD54LQ92698 747 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 APBB2Q92870 758 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
CCS-206ENST00000530961 PYM1Q9BRP8 204 aaKnown RBP16.97■□□□□ 0.31
CCS-206ENST00000530961 GCOM2Q9BZD3 368 aaPredicted RBP16.97■□□□□ 0.31
CCS-206ENST00000530961 INO80BQ9C086 356 aaPredicted RBP16.97■□□□□ 0.31
CCS-206ENST00000530961 MTIF3Q9H2K0 278 aaKnown RBP16.97■□□□□ 0.31
CCS-206ENST00000530961 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms