RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 RASSF7Q02833 373 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 NONOQ15233 471 aaKnown RBP eCLIP9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 MTHFD1LQ6UB35 978 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 TMEM179Q6ZVK1 233 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 MTMR8Q96EF0 704 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 PPANQ9NQ55 473 aaKnown RBP9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 ZNRF3Q9ULT6 936 aa9.37□□□□□ -0.91
FOXRED1-210ENST00000530642 DPPA5A6NC42 116 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 ZNF185O15231 689 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 FAM107AO95990 144 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 TUBP50607 506 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 RBL2Q08999 1139 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 USP17L6PQ6QN14 398 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 SAMD7Q7Z3H4 446 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 REXO1Q8N1G1 1221 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 TRIML1Q8N9V2 468 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 PAGE5Q96GU1 130 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 UBE2OQ9C0C9 1292 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 SLC5A4Q9NY91 659 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 PPP1R11O60927 126 aaPredicted RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 MAPK1P28482 360 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 MORC3Q14149 939 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 ABCB5Q2M3G0 1257 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 DTHD1Q6ZMT9 781 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 SYCP3Q8IZU3 236 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 ARL10Q8N8L6 244 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 AGAP11Q8TF27 550 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 GLIS2Q9BZE0 524 aaPredicted RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
FOXRED1-210ENST00000530642 LAMA3Q16787 3333 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 PDE2AO00408 941 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 RNASE9P60153 205 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 SLC7A5Q01650 507 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 PPP1R7Q15435 360 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 TBC1D10BQ4KMP7 808 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 NUGGCQ68CJ6 796 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 CAPN12Q6ZSI9 719 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 NEK8Q86SG6 692 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 AGBL3Q8NEM8 1001 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 DCAF4Q8WV16 495 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 BICD1Q96G01 975 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 VPS16Q9H269 839 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 TMOD2Q9NZR1 351 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ZNF70Q9UC06 446 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 HERC5Q9UII4 1024 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 TARSL2A2RTX5 802 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 AKR1B15C9JRZ8 316 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ZBTB5O15062 677 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 OPA1O60313 960 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ATP1A1P05023 1023 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 CLTAP09496 248 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 CASP14P31944 242 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 SLC1A4P43007 532 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 CD151P48509 253 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 C2orf54Q08AI8 447 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 BYSLQ13895 437 aaKnown RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ECM1Q16610 540 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 LRRC23Q53EV4 343 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 SLFN13Q68D06 897 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 KDM7AQ6ZMT4 941 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 TRAPPC11Q7Z392 1133 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 NIM1KQ8IY84 436 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 MLKLQ8NB16 471 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 TBCKQ8TEA7 893 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 FAM151AQ8WW52 585 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 ZIM3Q96PE6 472 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 LRRC27Q9C0I9 530 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 PANK4Q9NVE7 773 aa9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 CUEDC1Q9NWM3 386 aaPredicted RBP9.35□□□□□ -0.91
FOXRED1-210ENST00000530642 MCM3P25205 808 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms