RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CUTAO60888 179 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 ACRP10323 421 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 GHRP10912 638 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CYP11B2P19099 503 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 PLCG1P19174 1290 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 ARL2P36404 184 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 DNM2P50570 870 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CRYBB1P53674 252 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 NLRP11P59045 1033 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CDC42EP1Q00587 391 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 LPIN1Q14693 890 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TCTN1Q2MV58 587 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 NAALADL2Q58DX5 795 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SPECC1Q5M775 1068 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 C9orf50Q5SZB4 431 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CNKSR3Q6P9H4 555 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SHC4Q6S5L8 630 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 PADI6Q6TGC4 694 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TSHZ1Q6ZSZ6 1077 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 DEFB128Q7Z7B8 93 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 ZNF410Q86VK4 478 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 RPUSD2Q8IZ73 545 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TDHQ8IZJ6 230 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SYT2Q8N9I0 419 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 USP38Q8NB14 1042 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 MCPH1Q8NEM0 835 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 TCP11Q8WWU5 503 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 PSPC1Q8WXF1 523 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 HERVK_113Q902F9 699 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CALML4Q96GE6 196 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SPATA32Q96LK8 384 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CCDC43Q96MW1 224 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 UBE2OQ9C0C9 1292 aaKnown RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 ADAMTS10Q9H324 1103 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CDHR5Q9HBB8 845 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 BMP2KQ9NSY1 1161 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 SUCLA2Q9P2R7 463 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 STK17AQ9UEE5 414 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 PCDHA7Q9UN72 937 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 COL4A3BPQ9Y5P4 624 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 FNDC1Q4ZHG4 1894 aaPredicted RBP6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 NLRC5Q86WI3 1866 aa6.3□□□□□ -1.4
RPUSD4-204ENST00000530036 CDH23Q9H251 3354 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 CUL9Q8IWT3 2517 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 FAM237AA0A1B0GTK4 181 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RBAK-RBAKDNI3L0D1 243 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 BAIAP3O94812 1187 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PLA2G4BP0C869 781 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 DARSP14868 501 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 GLRA2P23416 452 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 EIF4BP23588 611 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 GUCY2CP25092 1073 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 TXLNAP40222 546 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ME1P48163 572 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 SLC12A3P55017 1021 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 LAMTOR4Q0VGL1 99 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 MAPK7Q13164 816 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 CAPSQ13938 189 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 MXD4Q14582 209 aaPredicted RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 SHHQ15465 462 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 E2F4Q16254 413 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RALGAPA2Q2PPJ7 1873 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RESP18Q5W5W9 173 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ADALQ6DHV7 355 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RINT1Q6NUQ1 792 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 FAM43BQ6ZT52 329 aaPredicted RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 C1orf186Q6ZWK4 172 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 FAM228AQ86W67 206 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 IFNLR1Q8IU57 520 aaPredicted RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RHPN2Q8IUC4 686 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 KSR1Q8IVT5 923 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 DAW1Q8N136 415 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 DBF4BQ8NFT6 615 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ASAP3Q8TDY4 903 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PRPF31Q8WWY3 499 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 SEPT8Q92599 483 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 LARP4BQ92615 738 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RAD54LQ92698 747 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 APBB2Q92870 758 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 TMEM143Q96AN5 459 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PPP1R16BQ96T49 567 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PLIN2Q99541 437 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 OSMRQ99650 979 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 TIPINQ9BVW5 301 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 NFKBIZQ9BYH8 718 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 IFIH1Q9BYX4 1025 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 POLR3FQ9H1D9 316 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms