RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 ADGRB3O60242 1522 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SERPINB4P48594 390 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 MKRN4PQ13434 485 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF746Q6NUN9 644 aaPredicted RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 KRT27Q7Z3Y8 459 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 PSPC1Q8WXF1 523 aaKnown RBP8.16□□□□□ -1.1
CTNND1-223ENST00000529986 HOOK2Q96ED9 719 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF577Q9BSK1 485 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 MIS12Q9H081 205 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 SLC40A1Q9NP59 571 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 KMT5AQ9NQR1 393 aa8.16□□□□□ -1.1
CTNND1-223ENST00000529986 CDC42BPGQ6DT37 1551 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ABCA9Q8IUA7 1624 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PFDN6O15212 129 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PRPSAP2O60256 369 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 LPXNO60711 386 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 SERPINB3P29508 390 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ALDH18A1P54886 795 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ARL4CP56559 192 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 USP17L2Q6R6M4 530 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PI4K2BQ8TCG2 481 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 STAMBPL1Q96FJ0 436 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 TRIM15Q9C019 465 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 COPRSQ9NQ92 184 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 DLGAP2Q9P1A6 1054 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PRAMEF22A3QJZ6 481 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 GTPBP10A4D1E9 387 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 SRGAP2BP0DMP2 458 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PHKG2P15735 406 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 TRPC1P48995 793 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 RPS8P62241 208 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 CHRNDQ07001 517 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 CERKLQ49MI3 558 aaPredicted RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF394Q53GI3 561 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 FSCBQ5H9T9 825 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 C1orf54Q8WWF1 131 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 SEC16BQ96JE7 1060 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 KIF9Q9HAQ2 790 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 OLA1Q9NTK5 396 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 L3MBTL1Q9Y468 752 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ROBO2Q9HCK4 1378 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ZNF18P17022 549 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 GAP43P17677 238 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ARL4AP40617 200 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ICA1Q05084 483 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 RHOT2Q8IXI1 618 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ZBED8Q8IZ13 594 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 CCNYL1Q8N7R7 359 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.14e-16■□□□□ 9.4
CTNND1-223ENST00000529986 CEP72Q9P209 647 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 DBR1Q9UK59 544 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 HPCAL4Q9UM19 191 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 ARHGAP26Q9UNA1 814 aa8.15□□□□□ -1.1
CTNND1-223ENST00000529986 MRPL11Q9Y3B7 192 aaKnown RBP8.15□□□□□ -1.1
CTNND1-223ENST00000529986 PYGBP11216 843 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 SCP2P22307 547 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 PRAMEP78395 509 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 UBE3AQ05086 875 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 LRRC63Q05C16 580 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 GIPC2Q8TF65 315 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 CHP1Q99653 195 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 KCNG1Q9UIX4 513 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 PNMA2Q9UL42 364 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.11
CTNND1-223ENST00000529986 SYNGAP1Q96PV0 1343 aa8.15□□□□□ -1.11
CTNND1-223ENST00000529986 DAB1O75553 588 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PDIA2Q13087 525 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CTTNQ14247 550 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PPP6R3Q5H9R7 873 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ALKBH8Q96BT7 664 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 SPATA17Q96L03 361 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 BPIFA3Q9BQP9 254 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 SEMA3EO15041 775 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 MYL1P05976 194 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 HLA-DPA1P20036 260 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PTPREP23469 700 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PSMA2P25787 234 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ADD2P35612 726 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ACAD11Q709F0 780 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ADPGKQ9BRR6 497 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 IVNS1ABPQ9Y6Y0 642 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PTCH1Q13635 1447 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TCP10L2B9ZVM9 353 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 LSP1P33241 339 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 IRAK1P51617 712 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CORO7P57737 925 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TSPY1Q01534 308 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CCDC137Q6PK04 289 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 DYNLL2Q96FJ2 89 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 KIFC3Q9BVG8 833 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF408Q9H9D4 720 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 NPHS2Q9NP85 383 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 BATF3Q9NR55 127 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 LIMA1Q9UHB6 759 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 HEY1Q9Y5J3 304 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms