RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 KIZQ2M2Z5 673 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 CLEC4GQ6UXB4 293 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 MASTLQ96GX5 879 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 PHACTR3Q96KR7 559 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 ZFYVE21Q9BQ24 234 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 ANKRD31Q8N7Z5 1873 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 DNAJC8O75937 253 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 COL6A2P12110 1019 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 JUNBP17275 347 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 HSD3B2P26439 372 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 GYS2P54840 703 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF460Q14592 562 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 CCDC93Q567U6 631 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 WWC2Q6AWC2 1192 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 KIAA0907Q7Z7F0 614 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF605Q86T29 641 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 MAGEB10Q96LZ2 347 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 FEZ1Q99689 392 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 ALG1Q9BT22 464 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 SLC6A17Q9H1V8 727 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 PLA2G2DQ9UNK4 145 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 TNPO3Q9Y5L0 923 aaKnown RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 USP16Q9Y5T5 823 aa6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 SIPA1L3O60292 1781 aaPredicted RBP6.59□□□□□ -1.35
AMBRA1-209ENST00000529963 COL11A2P13942 1736 aaPredicted RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 HTATSF1O43719 755 aaKnown RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 EFCAB14O75071 495 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 NPR1P16066 1061 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 PIP4K2AP48426 406 aaPredicted RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 ERVFRD-1P60508 538 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 MLANAQ16655 118 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 EGFLAMQ63HQ2 1017 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 ZNF662Q6ZS27 426 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 MCM10Q7L590 875 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 ZC3H7AQ8IWR0 971 aaKnown RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 PCDH19Q8TAB3 1148 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 NSUN3Q9H649 340 aaKnown RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 KLHL14Q9P2G3 628 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 COQ6Q9Y2Z9 468 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 X6R8D5 127 aa6.58□□□□□ -1.36
AMBRA1-209ENST00000529963 FER1L6Q2WGJ9 1857 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 CCDC88AQ3V6T2 1871 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 TCRBV16S1A1N1A0A5B0 115 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 OR14I1A6ND48 311 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 H7BY64 318 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 DDNO94850 711 aaPredicted RBP6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 MPOP05164 745 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 PYGMP11217 842 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 PAK1Q13153 545 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 ABHD17CQ6PCB6 329 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 CABP7Q86V35 215 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 NIM1KQ8IY84 436 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 Q8N1Y9 231 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 BCORQ6W2J9 1755 aa6.57□□□□□ -1.36
AMBRA1-209ENST00000529963 PRAMEF22A3QJZ6 481 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 ARVCFO00192 962 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 OPA1O60313 960 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 CYBBP04839 570 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 ALDH1B1P30837 517 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 DNM2P50570 870 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 TAF7Q15545 349 aaPredicted RBP6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 CNNM4Q6P4Q7 775 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 LDHDQ86WU2 507 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 RTKN2Q8IZC4 609 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 SYNPOQ8N3V7 929 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 PIP4K2CQ8TBX8 421 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 PNISRQ8TF01 805 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 NINJ1Q92982 152 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 DICER1Q9UPY3 1922 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 SLX4Q8IY92 1834 aa6.56□□□□□ -1.36
AMBRA1-209ENST00000529963 KLRG2A4D1S0 409 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 ANKRD62A6NC57 917 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 FAM47E-STBD1D6RA91 191 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 NKRFO15226 690 aaKnown RBP eCLIP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 CA12O43570 354 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 DGKIO75912 1065 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 GNAT1P11488 350 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 ECE1P42892 770 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 PRR5P85299 388 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 DEFB115Q30KQ5 88 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 PLEKHN1Q494U1 663 aaPredicted RBP6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 MROH9Q5TGP6 573 aa6.55□□□□□ -1.36
AMBRA1-209ENST00000529963 TMC6Q7Z403 805 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms