RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 PPP2R2AP63151 447 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 AOC3Q16853 763 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 PPP4R3CPQ6ZMV5 832 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 TMEM179Q6ZVK1 233 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 CCDC89Q8N998 374 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 BLOC1S4Q9NUP1 217 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 MAP2K7O14733 419 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 MDH1P40925 334 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 KCNA1Q09470 495 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 NAB2Q15742 525 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF473Q8WTR7 871 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 LXNQ9BS40 222 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 WDR11Q9BZH6 1224 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 INTS2Q9H0H0 1204 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 KLHL11Q9NVR0 708 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 NXF1Q9UBU9 619 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 KLRC4O43908 158 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SMAD1Q15797 465 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 MUM1L1Q5H9M0 696 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 KLHDC7AQ5VTJ3 777 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 CASC4Q6P4E1 433 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 CREG2Q8IUH2 290 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 NLGN1Q8N2Q7 840 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 ACCSQ96QU6 501 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF341Q9BYN7 854 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 RAVER2Q9HCJ3 691 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 FBXO28Q9NVF7 368 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 PIK3CAP42336 1068 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 PMS2P54278 862 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 BFSP1Q12934 665 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 CCDC137Q6PK04 289 aaKnown RBP10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SCARA5Q6ZMJ2 495 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 MMGT1Q8N4V1 131 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 BTBD6Q96KE9 485 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 C11orf70Q9BRQ4 267 aa10.68□□□□□ -0.7
CCDC90B-214ENST00000529689 GOLGB1Q14789 3259 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 GPR75-ASB3A0A0A6YYF3 556 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 H0Y3Z8 333 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SGK1O00141 431 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 AKAP3O75969 853 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 POLGP54098 1239 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SYCP2LQ5T4T6 812 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 CYFIP1Q7L576 1253 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 ZNF571Q7Z3V5 609 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PALM2Q8IXS6 379 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 VPS52Q8N1B4 723 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 MCUR1Q96AQ8 359 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 IKZF4Q9H2S9 585 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 QTRT2Q9H974 415 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 TMEM51Q9NW97 253 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PSD3Q9NYI0 1048 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SOX5P35711 763 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PPP2R5EQ16537 467 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 RUSC1Q9BVN2 902 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 KCND1Q9NSA2 647 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SPATA31A1Q5TZJ5 1347 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 MST1RQ04912 1400 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 HIP1RO75146 1068 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SUN1O94901 812 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 HSD17B3P37058 310 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 XXYLT1Q8NBI6 393 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 SPATA20Q8TB22 786 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 FAM20AQ96MK3 541 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 RAB20Q9NX57 234 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.67□□□□□ -0.7
CCDC90B-214ENST00000529689 RGPD8O14715 1765 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 LRRD1A4D1F6 860 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 PI4K2BG5E9Z4 385 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 CHRNA5P30532 468 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 VAMP7P51809 220 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 RWDD2BP57060 319 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 IGBP1P78318 339 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 GPC5P78333 572 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 COG2Q14746 738 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 BRDTQ58F21 947 aaPredicted RBP10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 ANKRD20A3Q5VUR7 823 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 RSAD2Q8WXG1 361 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 C9orf72Q96LT7 481 aa10.66□□□□□ -0.7
CCDC90B-214ENST00000529689 NUP85Q9BW27 656 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms