RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 BDP1A6H8Y1 2624 aa14.63□□□□□ -0.07
CPSF1-204ENST00000529288 CCDC194A0A1B0GVG4 234 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 HOXA2O43364 376 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 EPB41L2O43491 1005 aaKnown RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 CDKL5O76039 1030 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 DARSP14868 501 aaKnown RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 LAG3P18627 525 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 DNM2P50570 870 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 TTC3P53804 2025 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 ERVFC1P60507 584 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 SCRN1Q12765 414 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 DRP2Q13474 957 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 SMAD4Q13485 552 aaKnown RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 XKR3Q5GH77 459 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 PLPP4Q5VZY2 271 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 GALNT17Q6IS24 598 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 FAM43BQ6ZT52 329 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 KRT25Q7Z3Z0 450 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 ECHDC2Q86YB7 292 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 LINC01465Q8N7H1 131 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 GCOM2Q9BZD3 368 aaPredicted RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 TMEM117Q9H0C3 514 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 CWH43Q9H720 699 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 ELAC1Q9H777 363 aaKnown RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 TLR9Q9NR96 1032 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 PRKAG3Q9UGI9 489 aa14.62□□□□□ -0.07
CPSF1-204ENST00000529288 PUF60Q9UHX1 559 aaKnown RBP14.62□□□□□ -0.07
CPSF1-204ENST00000529288 NLRC5Q86WI3 1866 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 CYP3A7-CYP3A51PA0A087WV96 503 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 DCXO43602 365 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 XBP1P17861 261 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 CYP3A7P24462 503 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 CA8P35219 290 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 PBX3P40426 434 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 SMAD2Q15796 467 aaKnown RBP14.61□□□□□ -0.07
CPSF1-204ENST00000529288 LONRF3Q496Y0 759 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 RDM1Q8NG50 284 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 CASD1Q96PB1 797 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 ENTPD7Q9NQZ7 604 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 GJB4Q9NTQ9 266 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 SUCLA2Q9P2R7 463 aaPredicted RBP14.61□□□□□ -0.07
CPSF1-204ENST00000529288 RALGAPA2Q2PPJ7 1873 aa14.61□□□□□ -0.07
CPSF1-204ENST00000529288 A0A087WZ62 844 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 M0R2N6 131 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 SLC37A4O43826 429 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 CCNT1O60563 726 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 UBE3AQ05086 875 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 TARBP2Q15633 366 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 NPY5RQ15761 445 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 LLGL2Q6P1M3 1020 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 KCNT2Q6UVM3 1135 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 LRRC55Q6ZSA7 311 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 PIK3AP1Q6ZUJ8 805 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 RHPN2Q8IUC4 686 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 ETNPPLQ8TBG4 499 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 HELQQ8TDG4 1101 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 ZNF558Q96NG5 402 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 FDXACB1Q9BRP7 624 aaPredicted RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 NIFKQ9BYG3 293 aaKnown RBP14.6□□□□□ -0.07
CPSF1-204ENST00000529288 RNF19AQ9NV58 838 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 CLEC1BQ9P126 229 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
CPSF1-204ENST00000529288 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 EML1O00423 815 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-204ENST00000529288 PLA2G5P39877 138 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 FOSBP53539 338 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 PSMC5P62195 406 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 KRT17Q04695 432 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 TMC7Q7Z402 723 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 NEK8Q86SG6 692 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 KSR1Q8IVT5 923 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 MSLNLQ96KJ4 702 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 NLRP4Q96MN2 994 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 TCF25Q9BQ70 676 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 PHF20Q9BVI0 1012 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 APOL5Q9BWW9 433 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 BMP2KQ9NSY1 1161 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-204ENST00000529288 ORC3Q9UBD5 711 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-204ENST00000529288 MUTYHQ9UIF7 546 aa14.59□□□□□ -0.07
CPSF1-204ENST00000529288 PRR33A8MZF0 331 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 NT5C1B-RDH14C9J2C7 533 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 PFKFB2O60825 505 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 STBD1O95210 358 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 GLP2RO95838 553 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 NPEPPSP55786 919 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 CDC42EP1Q00587 391 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 DUSP6Q16828 381 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 CLLU1OSQ5K130 101 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 TWF2Q6IBS0 349 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms