RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 LMNAP02545 664 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 CHGBP05060 677 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 HNRNPCP07910 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 SKIP12755 728 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 PORP16435 677 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 HOXD10P28358 340 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 MATR3P43243 847 aaKnown RBP eCLIP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 CIAPIN1Q6FI81 312 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 RAB11FIP4Q86YS3 637 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 LRRC2Q9BYS8 371 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 NSRP1Q9H0G5 558 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 SH2D4AQ9H788 454 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 DDX43Q9NXZ2 648 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 R3HDM2Q9Y2K5 976 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 LUC7L2Q9Y383 392 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 USP15Q9Y4E8 981 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 MYH2Q9UKX2 1941 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 TRAF5O00463 557 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 CETN3O15182 167 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 P4HA2O15460 535 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 STRNO43815 780 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 UNC5CO95185 931 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 SPATA31D3P0C874 917 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 NPR1P16066 1061 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 GM2AP17900 193 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 RASA1P20936 1047 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 IL4RP24394 825 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 PDE6CP51160 858 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 USP11P51784 963 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 COPB1P53618 953 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 TTF1Q15361 905 aaPredicted RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 P3H1Q32P28 736 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 LIN52Q52LA3 116 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 THOC7Q6I9Y2 204 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 SPATA31D4Q6ZUB0 917 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 KIF2BQ8N4N8 673 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
C11orf88-203ENST00000529167 TBC1D16Q8TBP0 767 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 HESX1Q9UBX0 185 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 PRKAG3Q9UGI9 489 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 CAPN6Q9Y6Q1 641 aa8.63□□□□□ -1.03
C11orf88-203ENST00000529167 ESYT3A0FGR9 886 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NVLO15381 856 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SUPT3HO75486 399 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 CHN1P15882 459 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 VHLP40337 213 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 EIF3BP55884 814 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SLC44A4Q53GD3 710 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 FKBP15Q5T1M5 1219 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 WDR78Q5VTH9 848 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NFRKBQ6P4R8 1299 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NANOGNBQ7Z5D8 188 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SCUBE1Q8IWY4 988 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SLC7A5P1Q8MH63 180 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 OR2W6PQ8NHA6 318 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 DEPTORQ8TB45 409 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 FERMT2Q96AC1 680 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 OSBPL10Q9BXB5 764 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 LRRC27Q9C0I9 530 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 DCLRE1BQ9H816 532 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 ETNK2Q9NVF9 386 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NMRK1Q9NWW6 199 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 IL1RAPL1Q9NZN1 696 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TMEM59LQ9UK28 342 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 CHMP2BQ9UQN3 213 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 LCA5LO95447 670 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 PABPC4LP0CB38 370 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 CCT6AP40227 531 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 GEMIN4P57678 1058 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TMEM53Q6P2H8 277 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 CTU1Q7Z7A3 348 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 MYO1HQ8N1T3 1032 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 MDM1Q8TC05 714 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 DIS3LQ8TF46 1054 aaKnown RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TUBGCP5Q96RT8 1024 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NAP1L3Q99457 506 aaPredicted RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TLR10Q9BXR5 811 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 LRMDAQ9H2I8 198 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 NHEJ1Q9H9Q4 299 aaPredicted RBP8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 LNPEPQ9UIQ6 1025 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TMEM110-MUSTN1A8MSY1 372 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 ATP9AO75110 1047 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 ATP5HO75947 161 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SHBGP04278 402 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 VDRP11473 427 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 MAP7Q14244 749 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 MUM1Q2TAK8 710 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 TCP11X2Q5H9J9 407 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 SYDE2Q5VT97 1194 aa8.62□□□□□ -1.03
C11orf88-203ENST00000529167 MCM10Q7L590 875 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms