RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CLCN3P51790 818 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PTPN11Q06124 597 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 LRRC26Q2I0M4 334 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 FAM102BQ5T8I3 360 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 METTL13Q8N6R0 699 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SPATA20Q8TB22 786 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TIPINQ9BVW5 301 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KAT6AQ92794 2004 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RPN1P04843 607 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CYP2C9P11712 490 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 IDEP14735 1019 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 CAPN2P17655 700 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ARL2P36404 184 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 SARSP49591 514 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ZNF131P52739 623 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RBM43Q6ZSC3 357 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 RETREG2Q8NC44 543 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 BSNDQ8WZ55 320 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 POLR3FQ9H1D9 316 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TRMT13Q9NUP7 481 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 KIAA1468Q9P260 1216 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 ODF2LQ9ULJ1 636 aa13.47□□□□□ -0.25
TRAF3IP2-211ENST00000528599 TRIP12Q14669 1992 aaPredicted RBP13.46□□□□□ -0.25
TRAF3IP2-211ENST00000528599 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TBCAO75347 108 aaKnown RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PTGISQ16647 500 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 KMT5BQ4FZB7 885 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 L1TD1Q5T7N2 865 aaKnown RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 IER5Q5VY09 327 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 UNC13DQ70J99 1090 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 KIAA0319LQ8IZA0 1049 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ASAP3Q8TDY4 903 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PRPF31Q8WWY3 499 aaKnown RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 KIFAP3Q92845 792 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 HPS3Q969F9 1004 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SMARCE1Q969G3 411 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 DRC1Q96MC2 740 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TRPV6Q9H1D0 765 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SZT2Q5T011 3432 aa13.46□□□□□ -0.26
TRAF3IP2-211ENST00000528599 EVPLQ92817 2033 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 B4GALT4O60513 344 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 FAM13AO94988 1023 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SMC2O95347 1197 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 GLRA2P23416 452 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 EHHADHQ08426 723 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 COASYQ13057 564 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 CCDC65Q8IXS2 484 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 WNT8BQ93098 351 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 MAN1B1Q9UKM7 699 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 COL4A3BPQ9Y5P4 624 aa13.45□□□□□ -0.26
TRAF3IP2-211ENST00000528599 BIN1O00499 593 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 VTNP04004 478 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PLS3P13797 630 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 DNM2P50570 870 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 RTP1P59025 263 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 KCNB1Q14721 858 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 SNX17Q15036 470 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 MYCT1Q8N699 235 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 DNAJB3Q8WWF6 145 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PSPC1Q8WXF1 523 aaKnown RBP13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 GAP43P17677 238 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TMOD1P28289 359 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 PEX3P56589 373 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 CAPSQ13938 189 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TAF2Q6P1X5 1199 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 RHPN2Q8IUC4 686 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 DHX38Q92620 1227 aaKnown RBP13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 FIZ1Q96SL8 496 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 FGFBP2Q9BYJ0 223 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
TRAF3IP2-211ENST00000528599 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms