RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
CMTM1-211ENST00000528484 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 PLCD3Q8N3E9 789 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 TDRD5Q8NAT2 981 aaKnown RBP13.09□□□□□ -0.31
CMTM1-211ENST00000528484 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 ADAM7Q9H2U9 754 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 DZANK1Q9NVP4 752 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 BARHL2Q9NY43 387 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 CNTNAP5Q8WYK1 1306 aa13.09□□□□□ -0.31
CMTM1-211ENST00000528484 GPR32O75388 356 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 EIF4BP23588 611 aaKnown RBP13.08□□□□□ -0.32
CMTM1-211ENST00000528484 KCNC3Q14003 757 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 GIT2Q14161 759 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 APOA5Q6Q788 366 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
CMTM1-211ENST00000528484 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 ANO2Q9NQ90 1003 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 DBR1Q9UK59 544 aaKnown RBP13.08□□□□□ -0.32
CMTM1-211ENST00000528484 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
CMTM1-211ENST00000528484 PCDHA10Q9Y5I2 948 aa13.08□□□□□ -0.32
CMTM1-211ENST00000528484 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
CMTM1-211ENST00000528484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-211ENST00000528484 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 WDR64B1ANS9 1081 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 EOMESO95936 686 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 PBX3P40426 434 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 CLCN3P51790 818 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 FGD1P98174 961 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 CDC42EP1Q00587 391 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 DSC3Q14574 896 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 EFCAB12Q6NXP0 572 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 ACSF2Q96CM8 615 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-211ENST00000528484 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
CMTM1-211ENST00000528484 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
CMTM1-211ENST00000528484 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 ZBTB42B2RXF5 422 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 FAM86B1E9PN63 330 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 CXCL14O95715 111 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 CYP3A4P08684 503 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 SKIP12755 728 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 GNA11P29992 359 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 METAP2P50579 478 aaKnown RBP eCLIP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 RARS2Q5T160 578 aaKnown RBP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 HELQQ8TDG4 1101 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 LSG1Q9H089 658 aaKnown RBP13.06□□□□□ -0.32
CMTM1-211ENST00000528484 STK39Q9UEW8 545 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 USTQ9Y2C2 406 aa13.06□□□□□ -0.32
CMTM1-211ENST00000528484 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 A0A0U1RQF3 1178 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 BRD1O95696 1058 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 ATP4AP20648 1035 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 DNM2P50570 870 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 BCAR1P56945 870 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 TBC1D8BQ0IIM8 1120 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 PRR16Q569H4 304 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 CABP7Q86V35 215 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 NKD2Q969F2 451 aaPredicted RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
CMTM1-211ENST00000528484 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
CMTM1-211ENST00000528484 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
CMTM1-211ENST00000528484 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
CMTM1-211ENST00000528484 OATP04181 439 aa13.04□□□□□ -0.32
CMTM1-211ENST00000528484 DARSP14868 501 aaKnown RBP13.04□□□□□ -0.32
CMTM1-211ENST00000528484 RFX1P22670 979 aa13.04□□□□□ -0.32
CMTM1-211ENST00000528484 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
CMTM1-211ENST00000528484 NBL1P41271 181 aa13.04□□□□□ -0.32
CMTM1-211ENST00000528484 CLCN5P51795 746 aa13.04□□□□□ -0.32
CMTM1-211ENST00000528484 RCAN1P53805 252 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms