RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 SPECC1Q5M775 1068 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF618Q5T7W0 954 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 SWSAP1Q6NVH7 229 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 ADHFE1Q8IWW8 467 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 IGSF22Q8N9C0 903 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 RDM1Q8NG50 284 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 LEO1Q8WVC0 666 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 GLG1Q92896 1179 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 EIF2AK1Q9BQI3 630 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF302Q9NR11 478 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 RGL1Q9NZL6 768 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 PRKAG3Q9UGI9 489 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
CCDC90B-210ENST00000528149 A0A087WWV3 80 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 NBNO60934 754 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 CKBP12277 381 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 INSRRP14616 1297 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 KCNJ6P48051 423 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 PLXNA3P51805 1871 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 ERVK-21P61565 698 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 DEFB103AP81534 67 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 PRKCEQ02156 737 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 TMEM62Q0P6H9 643 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 CTTNQ14247 550 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 EPHA7Q15375 998 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 GRIK4Q16099 956 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 SNX29Q8TEQ0 813 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 TGS1Q96RS0 853 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 LXNQ9BS40 222 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 RAB34Q9BZG1 259 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 CSRNP2Q9H175 543 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 AZI2Q9H6S1 392 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 LRWD1Q9UFC0 647 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF215Q9UL58 517 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 SRPRBQ9Y5M8 271 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 GVINP1Q7Z2Y8 2422 aa12.92□□□□□ -0.34
CCDC90B-210ENST00000528149 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 PPP6R2O75170 966 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 MED24O75448 989 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 CCT6AP40227 531 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ME1P48163 572 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 STAT5BP51692 787 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 HERC4Q5GLZ8 1057 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 SERINC5Q86VE9 423 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ERMNQ8TAM6 284 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 AFAP1L1Q8TED9 768 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ZNF668Q96K58 619 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 MMTAG2Q9BU76 263 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 SMARCAD1Q9H4L7 1026 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
CCDC90B-210ENST00000528149 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 ZBTB39O15060 712 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 STBD1O95210 358 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 ZRSR1Q15695 479 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 LRRC8DQ7L1W4 858 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 TPH2Q8IWU9 490 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 PRRX2Q99811 253 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 SCAND2PQ9GZW5 306 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 FAM49AQ9H0Q0 323 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 PCDHA7Q9UN72 937 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 FAM50BQ9Y247 325 aa12.9□□□□□ -0.34
CCDC90B-210ENST00000528149 TMEM221A6NGB7 291 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 M0R296 226 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 CUTAO60888 179 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 OATP04181 439 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 THPOP40225 353 aa12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 QARSP47897 775 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-210ENST00000528149 PSMC5P62195 406 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms