RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PLCG2P16885 1265 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 PON1P27169 355 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 C6orf89Q6UWU4 347 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 LRRC57Q8N9N7 239 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 ACTR5Q9H9F9 607 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-208ENST00000527323 JMJD4Q9H9V9 463 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 MTMR4Q9NYA4 1195 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 SLC12A6Q9UHW9 1150 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 PCDHA2Q9Y5H9 948 aa13.59□□□□□ -0.23
CAPN1-208ENST00000527323 POTEFA5A3E0 1075 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 BTNL10A8MVZ5 291 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 DCDC2CA8MYV0 355 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 WNT10BO00744 389 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 CCDC172P0C7W6 258 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 POTEIP0CG38 1075 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 CASP5P51878 434 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 GKAP1Q5VSY0 366 aaPredicted RBP13.58□□□□□ -0.23
CAPN1-208ENST00000527323 POTEGQ6S5H5 508 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 SCLT1Q96NL6 688 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 AMFRQ9UKV5 643 aa13.58□□□□□ -0.23
CAPN1-208ENST00000527323 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 GFPT2O94808 682 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 FGGP02679 453 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SHMT1P34896 483 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 GSCP56915 257 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 PABPC4Q13310 644 aaKnown RBP eCLIP13.58□□□□□ -0.247e-7■■□□□ 12
CAPN1-208ENST00000527323 DRP2Q13474 957 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 AGBL2Q5U5Z8 902 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 GJB7Q6PEY0 223 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SYCE1Q8N0S2 351 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 GLIS2Q9BZE0 524 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 MYH1P12882 1939 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 TRIM51Q9BSJ1 452 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 OSBPL7Q9BZF2 842 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SLITRK6Q9H5Y7 841 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
CAPN1-208ENST00000527323 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
CAPN1-208ENST00000527323 CLIC2O15247 247 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 GH2P01242 217 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 ABCB4P21439 1286 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 ECE1P42892 770 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 TMC3Q7Z5M5 1100 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 FRMD5Q7Z6J6 570 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 PSMD1Q99460 953 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 DHX36Q9H2U1 1008 aaKnown RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 ZNF70Q9UC06 446 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SNED1Q8TER0 1413 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 LAMB1P07942 1786 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 DNM1LO00429 736 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 CALUO43852 315 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 MED24O75448 989 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 RASSF9O75901 435 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SNCBQ16143 134 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SFR1Q86XK3 245 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SUPT20HQ8NEM7 779 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SELENOSQ9BQE4 189 aa13.57□□□□□ -0.24
CAPN1-208ENST00000527323 SUCLA2Q9P2R7 463 aaPredicted RBP13.57□□□□□ -0.24
CAPN1-208ENST00000527323 PPP1R11O60927 126 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-208ENST00000527323 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-208ENST00000527323 GALCP54803 685 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 FMO2Q99518 471 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 RNF181Q9P0P0 153 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 CTNND1O60716 968 aaKnown RBP13.56□□□□□ -0.24
CAPN1-208ENST00000527323 AKAP3O75969 853 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
CAPN1-208ENST00000527323 COPB2P35606 906 aa13.56□□□□□ -0.24
CAPN1-208ENST00000527323 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms