RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 ITGA4P13612 1032 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 GMCL1Q96IK5 515 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 LUC7LQ9NQ29 371 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 HERC5Q9UII4 1024 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 HACL1Q9UJ83 578 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 ASTN1O14525 1302 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 EPHB4P54760 987 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 MAATS1Q7Z4T9 603 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 NAGPAQ9UK23 515 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 EPB41P11171 864 aaKnown RBP13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 PRLRP16471 622 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 RINT1Q6NUQ1 792 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 GLYCTKQ8IVS8 523 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 RNF10Q8N5U6 811 aaKnown RBP13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 OSGEPQ9NPF4 335 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 HPDP32754 393 aaPredicted RBP13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 IRAK1P51617 712 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 CFAP58Q5T655 872 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 IFT20Q8IY31 132 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 WDR11Q9BZH6 1224 aa13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
CHMP1B-201ENST00000526991 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 IVLP07476 585 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 PPP2R5AQ15172 486 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 DAAM2Q86T65 1068 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 SLC35C1Q96A29 364 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 CAPS2Q9BXY5 557 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 AIPL1Q9NZN9 384 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 ATRNL1Q5VV63 1379 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 CYP3A7-CYP3A51PA0A087WV96 503 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 TGFB1I1O43294 461 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 CYP3A7P24462 503 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 NNTQ13423 1086 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 BCAS4Q8TDM0 211 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 INPP4AQ96PE3 977 aaPredicted RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 NUCKS1Q9H1E3 243 aaKnown RBP13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
CHMP1B-201ENST00000526991 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 SREBF1P36956 1147 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 USP8P40818 1118 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 AP3B2Q13367 1082 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 EPHA7Q15375 998 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 NBPF20Q3BBV1 942 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 ICE2Q659A1 982 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 PEX26Q7Z412 305 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 DPH5Q9H2P9 285 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 AMACRQ9UHK6 382 aa13.02□□□□□ -0.32
CHMP1B-201ENST00000526991 FRMD3A2A2Y4 597 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 DDX3XO00571 662 aaKnown RBP eCLIP13.02□□□□□ -0.333e-10■■■■□ 21.2
CHMP1B-201ENST00000526991 GAS7O60861 476 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 SLITRK3O94933 977 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 GUCY1A3Q02108 690 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF211Q13398 564 aaPredicted RBP13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 TRPM4Q8TD43 1214 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF233A6NK53 670 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 KIF4AO95239 1232 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 HMGCS2P54868 508 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 CBWD6Q4V339 395 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 CBWD3Q5JTY5 395 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 CBWD5Q5RIA9 395 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 FRMD5Q7Z6J6 570 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 CRYGNQ8WXF5 182 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 WRNIP1Q96S55 665 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF577Q9BSK1 485 aa13.02□□□□□ -0.33
CHMP1B-201ENST00000526991 TSPYL1Q9H0U9 437 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms