RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 CA3P07451 260 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 DARSP14868 501 aaKnown RBP16.79■□□□□ 0.28
HIF3A-210ENST00000526506 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 PPP2R2DQ66LE6 453 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 ARL6IP4Q66PJ3 421 aaKnown RBP16.79■□□□□ 0.28
HIF3A-210ENST00000526506 FAM117BQ6P1L5 589 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 SNX29Q8TEQ0 813 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 PSPC1Q8WXF1 523 aaKnown RBP16.79■□□□□ 0.28
HIF3A-210ENST00000526506 TOP1MTQ969P6 601 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 TMEM143Q96AN5 459 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 ZNF668Q96K58 619 aaPredicted RBP16.79■□□□□ 0.28
HIF3A-210ENST00000526506 RAD9AQ99638 391 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 MTRQ99707 1265 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 ATP6V0A4Q9HBG4 840 aa16.79■□□□□ 0.28
HIF3A-210ENST00000526506 DBR1Q9UK59 544 aaKnown RBP16.79■□□□□ 0.28
HIF3A-210ENST00000526506 A0A087WWV3 80 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 VWA3AA6NCI4 1184 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 PP2D1A8MPX8 630 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 UPP2O95045 317 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
HIF3A-210ENST00000526506 PRPF31Q8WWY3 499 aaKnown RBP16.78■□□□□ 0.28
HIF3A-210ENST00000526506 LINC01599Q8WXQ3 324 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-210ENST00000526506 TSPYL2Q9H2G4 693 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-210ENST00000526506 ZSCAN16Q9H4T2 348 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-210ENST00000526506 XPNPEP1Q9NQW7 623 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
HIF3A-210ENST00000526506 ARID2Q68CP9 1835 aa16.77■□□□□ 0.28
HIF3A-210ENST00000526506 LAMA2P24043 3122 aaKnown RBP16.77■□□□□ 0.28
HIF3A-210ENST00000526506 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
HIF3A-210ENST00000526506 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-210ENST00000526506 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
HIF3A-210ENST00000526506 GUCD1Q96NT3 240 aa16.77■□□□□ 0.28
HIF3A-210ENST00000526506 INSL6Q9Y581 213 aa16.77■□□□□ 0.28
HIF3A-210ENST00000526506 GBF1Q92538 1859 aa16.77■□□□□ 0.27
HIF3A-210ENST00000526506 A0A087WZ62 844 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 DENND3A2RUS2 1198 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 LCHNA4D1U4 455 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 ARHGEF35A5YM69 484 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 ASAP2O43150 1006 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 CDC25AP30304 524 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 HTRA4P83105 476 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 LAMTOR4Q0VGL1 99 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 GRIN2CQ14957 1233 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 ECM1Q16610 540 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 YME1L1Q96TA2 773 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 ADAM2Q99965 735 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 FDXACB1Q9BRP7 624 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 INO80BQ9C086 356 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 C1orf112Q9NSG2 853 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
HIF3A-210ENST00000526506 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 LOXHD1Q8IVV2 1947 aa16.76■□□□□ 0.27
HIF3A-210ENST00000526506 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 TAP1Q03518 808 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 MXD4Q14582 209 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-210ENST00000526506 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 PADI6Q6TGC4 694 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 AK8Q96MA6 479 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 CDX2Q99626 313 aaPredicted RBP16.75■□□□□ 0.27
HIF3A-210ENST00000526506 MMTAG2Q9BU76 263 aaKnown RBP16.75■□□□□ 0.27
HIF3A-210ENST00000526506 BHMT2Q9H2M3 363 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
HIF3A-210ENST00000526506 MGEA5O60502 916 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
HIF3A-210ENST00000526506 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 ZSCAN20P17040 1043 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-210ENST00000526506 FGFR4P22455 802 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 ARL2P36404 184 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 SARSP49591 514 aaKnown RBP16.74■□□□□ 0.27
HIF3A-210ENST00000526506 TFDP1Q14186 410 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 SLC24A5Q71RS6 500 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 NPAS4Q8IUM7 802 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 RNF149Q8NC42 400 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 POLR3FQ9H1D9 316 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-210ENST00000526506 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-210ENST00000526506 DNM3Q9UQ16 869 aa16.74■□□□□ 0.27
HIF3A-210ENST00000526506 CYP11B2P19099 503 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
HIF3A-210ENST00000526506 PHKA2P46019 1235 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 DSC3Q14574 896 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 PTPAQ15257 358 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 ZRSR1Q15695 479 aaKnown RBP16.73■□□□□ 0.27
HIF3A-210ENST00000526506 MAEAQ7L5Y9 396 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 CRIPAKQ8N1N5 446 aa16.73■□□□□ 0.27
HIF3A-210ENST00000526506 KCTD17Q8N5Z5 321 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms