RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 GLRBP48167 497 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 EPHB3P54753 998 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 TRIM25Q14258 630 aaKnown RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 RTP5Q14D33 572 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 ACAP2Q15057 778 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 TTC38Q5R3I4 469 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 SLFN12LQ6IEE8 588 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 CXorf57Q6NSI4 855 aaKnown RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 ESPNLQ6ZVH7 1005 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 SMARCC2Q8TAQ2 1214 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 PPM1EQ8WY54 764 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 JADE3Q92613 823 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 MAML3Q96JK9 1138 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 TEKT5Q96M29 485 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 KRTAP4-5Q9BYR2 181 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 SLC13A1Q9BZW2 595 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 PRDM11Q9NQV5 511 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 CHST12Q9NRB3 414 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 GNL3LQ9NVN8 582 aaKnown RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 DNAJC28Q9NX36 388 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 MBD1Q9UIS9 605 aaPredicted RBP6.15□□□□□ -1.42
USP47-206ENST00000525367 TMPRSS11EQ9UL52 423 aa6.15□□□□□ -1.42
USP47-206ENST00000525367 TRIM75PA6NK02 468 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 SNUPNO95149 360 aaKnown RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 IL18BPO95998 194 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 PF4V1P10720 104 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 CCT2P78371 535 aaKnown RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 PURAQ00577 322 aaKnown RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 CACNB2Q08289 660 aaPredicted RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 ADCY1Q08828 1119 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 TMEM62Q0P6H9 643 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 TCIRG1Q13488 830 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 NOLC1Q14978 699 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP47-206ENST00000525367 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP47-206ENST00000525367 SKIDA1Q1XH10 827 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 VASNQ6EMK4 673 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 LYSMD2Q8IV50 215 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 CPA6Q8N4T0 437 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 FERMT2Q96AC1 680 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 FOXB1Q99853 325 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 MCOLN1Q9GZU1 580 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 INCENPQ9NQS7 918 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 USP36Q9P275 1121 aaKnown RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
USP47-206ENST00000525367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
USP47-206ENST00000525367 ABLIM1O14639 778 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 NPHP1O15259 732 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 PCDH8O95206 1070 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 CFBP00751 764 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 C5AR1P21730 350 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 NKX3-2P78367 333 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 ADCY2Q08462 1091 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 PICALMQ13492 652 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 UGT8Q16880 541 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 RGL3Q3MIN7 710 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 C10orf62Q5T681 223 aaPredicted RBP6.13□□□□□ -1.43
USP47-206ENST00000525367 KIAA1841Q6NSI8 718 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 KCNK18Q7Z418 384 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 NME9Q86XW9 330 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 AMOTL1Q8IY63 956 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 CMTR2Q8IYT2 770 aaKnown RBP6.13□□□□□ -1.43
USP47-206ENST00000525367 DTX3Q8N9I9 347 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 ACAP3Q96P50 834 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 NOX5Q96PH1 765 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 GORASP1Q9BQQ3 440 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 TACO1Q9BSH4 297 aaKnown RBP6.13□□□□□ -1.43
USP47-206ENST00000525367 KCTD10Q9H3F6 313 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 HSPBP1Q9NZL4 362 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 MAGEL2Q9UJ55 1249 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 PNMA2Q9UL42 364 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 ZBTB21Q9ULJ3 1066 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
USP47-206ENST00000525367 BIN1O00499 593 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 PFKMP08237 780 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
USP47-206ENST00000525367 NCAM1P13591 858 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 RECQLP46063 649 aaPredicted RBP6.12□□□□□ -1.43
USP47-206ENST00000525367 LIMS1P48059 325 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 MTNR1BP49286 362 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 ITGA1P56199 1179 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 LGALS4P56470 323 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 IL13RA1P78552 427 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 ADAM9Q13443 819 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 MORC3Q14149 939 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 TTLL7Q6ZT98 887 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 KANSL1Q7Z3B3 1105 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 IGDCC3Q8IVU1 814 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 IGDCC4Q8TDY8 1250 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 TSPEARQ8WU66 669 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 CPA5Q8WXQ8 436 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 SIRT5Q9NXA8 310 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 DPP7Q9UHL4 492 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 ZFP69BQ9UJL9 534 aa6.12□□□□□ -1.43
USP47-206ENST00000525367 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms