RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 RNF180Q86T96 592 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 NME9Q86XW9 330 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 GPR135Q8IZ08 494 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 FUKQ8N0W3 1084 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 AHI1Q8N157 1196 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 C7orf31Q8N865 590 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 CHST13Q8NET6 341 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 ZNF496Q96IT1 587 aaPredicted RBP5.82□□□□□ -1.48
CD44-217ENST00000525348 PLA2G12BQ9BX93 195 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-217ENST00000525348 KCMF1Q9P0J7 381 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 FAM184BQ9ULE4 1060 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 CDC14BO60729 498 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 FKBP9O95302 570 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 LSSP48449 732 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 KPNA1P52294 538 aaPredicted RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 ADCY2Q08462 1091 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 SAFB2Q14151 953 aaKnown RBP eCLIP5.81□□□□□ -1.48
CD44-217ENST00000525348 LRRC32Q14392 662 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 DGKDQ16760 1214 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 ZBTB41Q5SVQ8 909 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 FKBP9P1Q75LS8 142 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 PHYKPLQ8IUZ5 450 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 GIMAP8Q8ND71 665 aaPredicted RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 OR2W6PQ8NHA6 318 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 DVL3Q92997 716 aaPredicted RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 PITHD1Q9GZP4 211 aaPredicted RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 KLC2Q9H0B6 622 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 C12orf65Q9H3J6 166 aaKnown RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 AGO3Q9H9G7 860 aaKnown RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 SAE1Q9UBE0 346 aaPredicted RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 DENND2AQ9ULE3 1009 aa5.81□□□□□ -1.48
CD44-217ENST00000525348 TMA7Q9Y2S6 64 aaKnown RBP5.81□□□□□ -1.48
CD44-217ENST00000525348 A0A0A6YYJ9 748 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 A0A0A6YYK5 440 aaPredicted RBP5.8□□□□□ -1.48
CD44-217ENST00000525348 C2orf78A6NCI8 922 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 APOL3O95236 402 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 INSRRP14616 1297 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 SCNN1BP51168 640 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 IL2P60568 153 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 ADAM8P78325 824 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 KIAA1841Q6NSI8 718 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 KLHDC10Q6PID8 442 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 Q6ZSN1 163 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 STRA8Q7Z7C7 330 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 ZZZ3Q8IYH5 903 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 UBR7Q8N806 425 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 SOX7Q9BT81 388 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 MTG2Q9H4K7 406 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 EMC7Q9NPA0 242 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 PUF60Q9UHX1 559 aaKnown RBP5.8□□□□□ -1.48
CD44-217ENST00000525348 DNAI1Q9UI46 699 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 MAPRE3Q9UPY8 281 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 VWA7Q9Y334 891 aa5.8□□□□□ -1.48
CD44-217ENST00000525348 C1QTNF3-AMACRE9PGA6 284 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 RAD17O75943 681 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 HNRNPLP14866 589 aaKnown RBP eCLIP5.79□□□□□ -1.48
CD44-217ENST00000525348 BPIP17213 487 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 CD40P25942 277 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 HSD3B2P26439 372 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 ID4P47928 161 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 SELENOPP49908 381 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 BCAR1P56945 870 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 PHC1P78364 1004 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 ATP2C1P98194 919 aaPredicted RBP5.79□□□□□ -1.48
CD44-217ENST00000525348 TERF2Q15554 542 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 BMP8AQ7Z5Y6 402 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 PALM2Q8IXS6 379 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 DYDC2Q96IM9 177 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 OR14A2Q96R54 314 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 GPR20Q99678 358 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 POLR3BQ9NW08 1133 aaPredicted RBP5.79□□□□□ -1.48
CD44-217ENST00000525348 MSRAQ9UJ68 235 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 SLC30A1Q9Y6M5 507 aa5.79□□□□□ -1.48
CD44-217ENST00000525348 SLC26A4O43511 780 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 OPHN1O60890 802 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 ADCY7P51828 1080 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 GPR158Q5T848 1215 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
CD44-217ENST00000525348 CLEC14AQ86T13 490 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 PASD1Q8IV76 773 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 ZNF610Q8N9Z0 462 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 RPGRQ92834 1020 aaKnown RBP5.78□□□□□ -1.48
CD44-217ENST00000525348 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 DEF6Q9H4E7 631 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 TSC22D4Q9Y3Q8 395 aa5.78□□□□□ -1.48
CD44-217ENST00000525348 RBM8AQ9Y5S9 174 aaKnown RBP5.78□□□□□ -1.48
CD44-217ENST00000525348 NEMP1O14524 444 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 MASP1P48740 699 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 FOXL1Q12952 345 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 RIN1Q13671 783 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 PUM1Q14671 1186 aaKnown RBP eCLIP5.77□□□□□ -1.49
CD44-217ENST00000525348 SART3Q15020 963 aaKnown RBP5.77□□□□□ -1.49
CD44-217ENST00000525348 DHCR24Q15392 516 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 SPRED1Q7Z699 444 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 SHCBP1Q8NEM2 672 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 WDR92Q96MX6 357 aa5.77□□□□□ -1.49
CD44-217ENST00000525348 PRDM12Q9H4Q4 367 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms