RNA–Protein interactions for RNA: ENST00000524852.1

CAVIN3-202, Transcript of caveolae associated protein 3, humanhuman

TSL 3

Gene CAVIN3, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-202ENST00000524852 ERVK-5Q9HDB9 667 aa18.11■□□□□ 0.49
CAVIN3-202ENST00000524852 DARSP14868 501 aaKnown RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 FOSL2P15408 326 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 SYT1P21579 422 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 SFPQP23246 707 aaKnown RBP eCLIP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 HTRA4P83105 476 aaPredicted RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 TFDP1Q14186 410 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 EMC2Q15006 297 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 ARL6IP4Q66PJ3 421 aaKnown RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 TMCO2Q7Z6W1 182 aaPredicted RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 NPAS4Q8IUM7 802 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 PRPF31Q8WWY3 499 aaKnown RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 GUCD1Q96NT3 240 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 DBR1Q9UK59 544 aaKnown RBP18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 PCDHB7Q9Y5E2 793 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
CAVIN3-202ENST00000524852 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 ATP2C1P98194 919 aaPredicted RBP18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 TAP1Q03518 808 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 NCBP1Q09161 790 aaKnown RBP18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 IGSF22Q8N9C0 903 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 MCPH1Q8NEM0 835 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 PIGOQ8TEQ8 1089 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 TMEM40Q8WWA1 233 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 TMEM143Q96AN5 459 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 NLRP4Q96MN2 994 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 SAMD11Q96NU1 681 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 TGS1Q96RS0 853 aaKnown RBP18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 ADAM2Q99965 735 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 ZSCAN16Q9H4T2 348 aaPredicted RBP18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
CAVIN3-202ENST00000524852 A0A087WZ62 844 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 ARHGEF35A5YM69 484 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 ZBTB39O15060 712 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 MED24O75448 989 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 SRGAP2CP0DJJ0 459 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 SARSP49591 514 aaKnown RBP18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 RARRES1P49788 294 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 FERMT3Q86UX7 667 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 FAM228AQ86W67 206 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 FIBCD1Q8N539 461 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 KCTD17Q8N5Z5 321 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 ZNF579Q8NAF0 562 aaKnown RBP18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 MYLIPQ8WY64 445 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 FDXACB1Q9BRP7 624 aaPredicted RBP18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 PRDM12Q9H4Q4 367 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 CHST12Q9NRB3 414 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 RGS18Q9NS28 235 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 DNM3Q9UQ16 869 aa18.08■□□□□ 0.48
CAVIN3-202ENST00000524852 STX6O43752 255 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 PHKA2P46019 1235 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 LAMTOR4Q0VGL1 99 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 DRP2Q13474 957 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 SRGAP1Q7Z6B7 1085 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 ARNTL2Q8WYA1 636 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 CDK5RAP3Q96JB5 506 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 ZNF668Q96K58 619 aaPredicted RBP18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 TMX1Q9H3N1 280 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 KIAA1024Q9UPX6 916 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 RWDD3Q9Y3V2 267 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 LAMA3Q16787 3333 aa18.07■□□□□ 0.48
CAVIN3-202ENST00000524852 EVPLQ92817 2033 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 LINC01553A4QN01 128 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 VWA3AA6NCI4 1184 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 HOXA2O43364 376 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 SKIP12755 728 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 IBSPP21815 317 aaPredicted RBP18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 IGFBP4P22692 258 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 POU5F1BQ06416 359 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 BTG3Q14201 252 aaPredicted RBP18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 CATSPER4Q7RTX7 472 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 RTN4RL1Q86UN2 441 aaPredicted RBP18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 AK8Q96MA6 479 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 NT5C3AQ9H0P0 336 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 BMP2KQ9NSY1 1161 aaPredicted RBP18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 WDR81Q562E7 1941 aa18.06■□□□□ 0.48
CAVIN3-202ENST00000524852 LCHNA4D1U4 455 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 SLC26A4O43511 780 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 USO1O60763 962 aaKnown RBP18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 DGKIO75912 1065 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 ERVK-21P61565 698 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 PADI6Q6TGC4 694 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 RNF149Q8NC42 400 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 ELAC1Q9H777 363 aaKnown RBP18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 CERS4Q9HA82 394 aa18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 DDX19AQ9NUU7 478 aaKnown RBP18.05■□□□□ 0.48
CAVIN3-202ENST00000524852 ERLIN2O94905 339 aa18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 UBA7P41226 1012 aa18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 FAM102BQ5T8I3 360 aa18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 KSR1Q8IVT5 923 aa18.04■□□□□ 0.48
CAVIN3-202ENST00000524852 LINC01599Q8WXQ3 324 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms