RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 AMHP03971 560 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PPFIA1Q13136 1202 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 COL19A1Q14993 1142 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 GRIK4Q16099 956 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 NTRK3Q16288 839 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PKN1Q16512 942 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PFKFB3Q16875 520 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 AAK1Q2M2I8 961 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 NAALADL2Q58DX5 795 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.83□□□□□ -1.321e-7■■□□□ 12.1
FAM49B-228ENST00000523993 Q6ZNB5 142 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 HEATR3Q7Z4Q2 680 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 SKAP1Q86WV1 359 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 CYP2W1Q8TAV3 490 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 ARNTL2Q8WYA1 636 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 SEPT8Q92599 483 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 TNPO1Q92973 898 aaKnown RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 OSBPL7Q9BZF2 842 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 RC3H2Q9HBD1 1191 aaKnown RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 SLC9A2Q9UBY0 812 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PCDHB11Q9Y5F2 797 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 V9GY48 417 aaPredicted RBP6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PLXNA4Q9HCM2 1894 aa6.83□□□□□ -1.32
FAM49B-228ENST00000523993 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 KLF18A0A0U1RQI7 1052 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 C5orf67F2Z3F1 127 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 SORBS3O60504 671 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 LINC00271P0C7V0 271 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 SCG2P13521 617 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 CIITAP33076 1130 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 ADCY7P51828 1080 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 NAPAP54920 295 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 ITGB3BPQ13352 177 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 CCDC85BQ15834 202 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 FBXO47Q5MNV8 452 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 UTP14CQ5TAP6 766 aaKnown RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 PTCRAQ6ISU1 281 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 ABHD15Q6UXT9 468 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 TMCO2Q7Z6W1 182 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 RSPH3Q86UC2 560 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 RAB11FIP4Q86YS3 637 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 NME8Q8N427 588 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 CCDC12Q8WUD4 166 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 TCEANC2Q96MN5 208 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 RNF26Q9BY78 433 aaPredicted RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 IFIH1Q9BYX4 1025 aaKnown RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 AGO4Q9HCK5 861 aaKnown RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 TSR3Q9UJK0 312 aaKnown RBP6.82□□□□□ -1.32
FAM49B-228ENST00000523993 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 PCDHA2Q9Y5H9 948 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 SNX14Q9Y5W7 946 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 COL1A2P08123 1366 aa6.82□□□□□ -1.32
FAM49B-228ENST00000523993 IGSF9BQ9UPX0 1349 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 SMIM35A0A1B0GVV1 85 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 FAM86B1E9PN63 330 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 H3BNC9 293 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 ENPP3O14638 875 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 REC8O95072 547 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 CCNE2O96020 404 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 RB1P06400 928 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 FAM86B2P0C5J1 330 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 ARP10275 920 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 INSRRP14616 1297 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 IFNAR1P17181 557 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 RPS6KB1P23443 525 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 PSMA5P28066 241 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 ERCC5P28715 1186 aaPredicted RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 GNA11P29992 359 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 METAP2P50579 478 aaKnown RBP eCLIP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 STAT5BP51692 787 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 ACTR2P61160 394 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 MRPS6P82932 125 aaKnown RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 SETQ01105 290 aaPredicted RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 LPIN1Q14693 890 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 NAA30Q147X3 362 aaPredicted RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 PLCB4Q15147 1175 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 EPC2Q52LR7 807 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 IER5Q5VY09 327 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 KRT40Q6A162 431 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 BLOC1S2Q6QNY1 142 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 THSD4Q6ZMP0 1018 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 RUFY4Q6ZNE9 571 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 TSHZ1Q6ZSZ6 1077 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 Q6ZUG5 572 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 MYOCDQ8IZQ8 938 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 HELQQ8TDG4 1101 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 PPM1EQ8WY54 764 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 GLG1Q92896 1179 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 ZNF689Q96CS4 500 aaPredicted RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 MRPL38Q96DV4 380 aaKnown RBP6.81□□□□□ -1.32
FAM49B-228ENST00000523993 SDF4Q9BRK5 362 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 FTHL17Q9BXU8 183 aa6.81□□□□□ -1.32
FAM49B-228ENST00000523993 TM6SF1Q9BZW5 370 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms