RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 NLRP5P59047 1200 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 PDE1BQ01064 536 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 IL1RL1Q01638 556 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 TMEM62Q0P6H9 643 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 CUL1Q13616 776 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 DHX34Q14147 1143 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 NAA25Q14CX7 972 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 CWF19L2Q2TBE0 894 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 ANO4Q32M45 955 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 DALRD3Q5D0E6 543 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 MCTP1Q6DN14 999 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 OR7E24Q6IFN5 339 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 CAPN12Q6ZSI9 719 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 NEK11Q8NG66 645 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 OR8K3Q8NH51 312 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 TRPM4Q8TD43 1214 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 BCL7CQ8WUZ0 217 aaPredicted RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 LMBR1Q8WVP7 490 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 PEX13Q92968 403 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 GJA10Q969M2 543 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 TIFAQ96CG3 184 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 VPS50Q96JG6 964 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 ZC3H10Q96K80 434 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 CEP19Q96LK0 163 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 NUDCD1Q96RS6 583 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 SIN3AQ96ST3 1273 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 MPHOSPH8Q99549 860 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 MNTQ99583 582 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 TTC1Q99614 292 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 ESF1Q9H501 851 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 C12orf10Q9HB07 376 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 PRDM5Q9NQX1 630 aaPredicted RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 ZNF277Q9NRM2 450 aaPredicted RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 IARS2Q9NSE4 1012 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 ATAD3AQ9NVI7 634 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.07□□□□□ -1.281e-10■■■■□ 26
SDC2-208ENST00000523877 FAM198AQ9UFP1 575 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
SDC2-208ENST00000523877 PCDHB4Q9Y5E5 795 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 PPIP5K1Q6PFW1 1433 aa7.07□□□□□ -1.28
SDC2-208ENST00000523877 A0A1B0GVC2 190 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 E2F8A0AVK6 867 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 MACROD2A1Z1Q3 448 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 LRRIQ4A6NIV6 560 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 LRRIQ3A6PVS8 624 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 IKBKBO14920 756 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 DDX3YO15523 660 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 RIPK2O43353 540 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 SIN3BO75182 1162 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 TSPAN9O75954 239 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 DDX58O95786 925 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 CD4P01730 458 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 APOEP02649 317 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 OPN1MWP04001 364 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 DNTTP04053 509 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 EIF2S1P05198 315 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 SLC3A2P08195 630 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 OPN1MW2P0DN77 364 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 OPN1MW3P0DN78 364 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 HSPA6P17066 643 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 POU3F3P20264 500 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 CDH3P22223 829 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 PRKACBP22694 351 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 AXLP30530 894 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 HNF4AP41235 474 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 SERPINB8P50452 374 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 ARHGDIBP52566 201 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 THOP1P52888 689 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 ZNF280AP59817 542 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 COG7P83436 770 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 MPP1Q00013 466 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 NFKB2Q00653 900 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 SPAG1Q07617 926 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 PIN1Q13526 163 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 BCL2A1Q16548 175 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 KRTCAP3Q53RY4 240 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 HSP90AA5PQ58FG0 334 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 TJAP1Q5JTD0 557 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 LIN54Q6MZP7 749 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 ALKBH5Q6P6C2 394 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 LDHAL6AQ6ZMR3 332 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 ARHGAP36Q6ZRI8 547 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 GALNTL5Q7Z4T8 443 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 GATAD2AQ86YP4 633 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 C12orf56Q8IXR9 622 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 C7orf57Q8NEG2 295 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 IL17RDQ8NFM7 739 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 GOT1L1Q8NHS2 421 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 CDC26Q8NHZ8 85 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 IFT81Q8WYA0 676 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 CCT6BQ92526 530 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 LTV1Q96GA3 475 aaPredicted RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 MAELQ96JY0 434 aaKnown RBP7.06□□□□□ -1.28
SDC2-208ENST00000523877 CCDC138Q96M89 665 aa7.06□□□□□ -1.28
SDC2-208ENST00000523877 TSC22D3Q99576 134 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms