RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 AGO4Q9HCK5 861 aaKnown RBP13.25□□□□□ -0.29
SDCBP-211ENST00000523441 ZNF302Q9NR11 478 aa13.25□□□□□ -0.29
SDCBP-211ENST00000523441 CYP26B1Q9NR63 512 aa13.25□□□□□ -0.29
SDCBP-211ENST00000523441 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
SDCBP-211ENST00000523441 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 HOXA2O43364 376 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 CCNE2O96020 404 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 LMNAP02545 664 aaKnown RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 ALDH7A1P49419 539 aaKnown RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 BCAR1P56945 870 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 NLRP11P59045 1033 aaKnown RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 DSC3Q14574 896 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 KIAA1841Q6NSI8 718 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 ECHDC2Q86YB7 292 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 DCLK2Q8N568 766 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 ST13P5Q8NFI4 369 aaPredicted RBP13.24□□□□□ -0.29
SDCBP-211ENST00000523441 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 RSAD2Q8WXG1 361 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
SDCBP-211ENST00000523441 NFASCO94856 1347 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 MAFGO15525 162 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 FAM189BP81408 668 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 TDGQ13569 410 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 ZNF484Q5JVG2 852 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 CASC1Q6TDU7 716 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
SDCBP-211ENST00000523441 LPPQ93052 612 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 ELAC1Q9H777 363 aaKnown RBP13.23□□□□□ -0.29
SDCBP-211ENST00000523441 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 TCEAL9Q9UHQ7 104 aa13.23□□□□□ -0.29
SDCBP-211ENST00000523441 FRYLO94915 3013 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 WDR81Q562E7 1941 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 PRC1O43663 620 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 GPR32O75388 356 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 DDAH1O94760 285 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 C22orf31O95567 290 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 DCNP07585 359 aaKnown RBP13.22□□□□□ -0.29
SDCBP-211ENST00000523441 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
SDCBP-211ENST00000523441 NAPAP54920 295 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 CCDC149Q6ZUS6 474 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 CNTNAP3BQ96NU0 1288 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 RTP3Q9BQQ7 232 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 LRRC2Q9BYS8 371 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 CNTNAP3Q9BZ76 1288 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 DZANK1Q9NVP4 752 aa13.22□□□□□ -0.29
SDCBP-211ENST00000523441 COL1A2P08123 1366 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 ZBTB42B2RXF5 422 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 IGHDP01880 384 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 ATP4AP20648 1035 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 KLRC2P26717 231 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 GNAQP50148 359 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 SLC26A2P50443 739 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 CEP55Q53EZ4 464 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 ABHD15Q6UXT9 468 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 OTOP3Q7RTS5 596 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 PLA2G4DQ86XP0 818 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.29
SDCBP-211ENST00000523441 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 ZBP1Q9H171 429 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 RWDD1Q9H446 243 aaPredicted RBP13.21□□□□□ -0.29
SDCBP-211ENST00000523441 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 DUSP12Q9UNI6 340 aa13.21□□□□□ -0.29
SDCBP-211ENST00000523441 DNAH14Q0VDD8 3507 aa13.21□□□□□ -0.3
SDCBP-211ENST00000523441 C2CD2LO14523 706 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 ATG7O95352 703 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 NUCB1Q02818 461 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
SDCBP-211ENST00000523441 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 SLC22A17Q8WUG5 538 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 BCL7CQ8WUZ0 217 aaPredicted RBP13.2□□□□□ -0.3
SDCBP-211ENST00000523441 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 USTQ9Y2C2 406 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 SAMM50Q9Y512 469 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
SDCBP-211ENST00000523441 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 KRBA1A5PL33 1030 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 ADCY7P51828 1080 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 COL9A3Q14050 684 aaPredicted RBP13.19□□□□□ -0.3
SDCBP-211ENST00000523441 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
SDCBP-211ENST00000523441 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
SDCBP-211ENST00000523441 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
SDCBP-211ENST00000523441 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms