RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ST6GALNAC4Q9H4F1 302 aa22.82■■□□□ 1.24
SQLE-206ENST00000523430 PDGFCQ9NRA1 345 aa22.82■■□□□ 1.24
SQLE-206ENST00000523430 FAM184BQ9ULE4 1060 aa22.82■■□□□ 1.24
SQLE-206ENST00000523430 MYH9P35579 1960 aaKnown RBP22.82■■□□□ 1.24
SQLE-206ENST00000523430 A0A1W2PQJ5 194 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 NPTX2P47972 431 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 GTF2BQ00403 316 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 CELF3Q5SZQ8 465 aaKnown RBP22.81■■□□□ 1.24
SQLE-206ENST00000523430 KIFAP3Q92845 792 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 COPS5Q92905 334 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 ASB14A6NK59 587 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 CCDC169A6NNP5 214 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 KCNH2Q12809 1159 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 EMC2Q15006 297 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 PTPN14Q15678 1187 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 HSDL1Q3SXM5 330 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 CCDC62Q6P9F0 684 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 KCNV1Q6PIU1 500 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 REXO1L1PQ8IX06 675 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 MCPH1Q8NEM0 835 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 BORCS6Q96GS4 357 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 ACCSQ96QU6 501 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 GPR20Q99678 358 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 DMAC2Q9NW81 257 aa22.81■■□□□ 1.24
SQLE-206ENST00000523430 LOC102724159A0A0B4J2E5 919 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 XRCC5P13010 732 aaKnown RBP22.8■■□□□ 1.24
SQLE-206ENST00000523430 POLGP54098 1239 aaPredicted RBP22.8■■□□□ 1.24
SQLE-206ENST00000523430 ZBED6P86452 979 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 PWP2Q15269 919 aaKnown RBP22.8■■□□□ 1.24
SQLE-206ENST00000523430 WDR59Q6PJI9 974 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 CYP26C1Q6V0L0 522 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 GPR142Q7Z601 462 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 TMTC1Q8IUR5 882 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 FAM186BQ8IYM0 893 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 TMEM161BQ8NDZ6 487 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 GOLGA5Q8TBA6 731 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 SEPT1Q8WYJ6 367 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 CHP1Q99653 195 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 CRACR2AQ9BSW2 395 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 POLR3FQ9H1D9 316 aaPredicted RBP22.8■■□□□ 1.24
SQLE-206ENST00000523430 TMEM206Q9H813 350 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 IVNS1ABPQ9Y6Y0 642 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 ADGRA3Q8IWK6 1321 aa22.8■■□□□ 1.24
SQLE-206ENST00000523430 CCP110O43303 1012 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 PSMC2P35998 433 aaKnown RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 ZNF157P51786 506 aaPredicted RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 FAM110CQ1W6H9 321 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 TRIM50Q86XT4 487 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 ABRAQ8N0Z2 381 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 AFAP1L1Q8TED9 768 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 LSM14BQ9BX40 385 aaKnown RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 METTL14Q9HCE5 456 aaKnown RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 IGF2BP3O00425 579 aaKnown RBP eCLIP22.79■■□□□ 1.24
SQLE-206ENST00000523430 ZSCAN12O43309 604 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 AFPP02771 609 aaKnown RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 TXNP10599 105 aaKnown RBP22.79■■□□□ 1.24
SQLE-206ENST00000523430 STAT5BP51692 787 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 APBA1Q02410 837 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 TCERG1LQ5VWI1 586 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 FAM160B1Q5W0V3 765 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 SLC35C1Q96A29 364 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 IQCDQ96DY2 449 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 CEP89Q96ST8 783 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 KMT5AQ9NQR1 393 aa22.79■■□□□ 1.24
SQLE-206ENST00000523430 MEA1Q16626 185 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 NEK11Q8NG66 645 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 SPIRE2Q8WWL2 714 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 SPATA33Q96N06 139 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 CBWD1Q9BRT8 395 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 MKNK1Q9BUB5 465 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 NIFKQ9BYG3 293 aaKnown RBP22.78■■□□□ 1.24
SQLE-206ENST00000523430 TBX20Q9UMR3 447 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 ADGRG1Q9Y653 693 aa22.78■■□□□ 1.24
SQLE-206ENST00000523430 DENND3A2RUS2 1198 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 NOP56O00567 594 aaKnown RBP22.77■■□□□ 1.24
SQLE-206ENST00000523430 SMTNP53814 917 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 GRB14Q14449 540 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 SLC9A9Q8IVB4 645 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 DHX37Q8IY37 1157 aaKnown RBP22.77■■□□□ 1.24
SQLE-206ENST00000523430 SLC17A8Q8NDX2 589 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 C17orf75Q9HAS0 396 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 CPA4Q9UI42 421 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 STRNO43815 780 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 NOL4O94818 638 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 CCDC175P0C221 793 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 MARK3P27448 753 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 RTP1P59025 263 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 PPP2R3AQ06190 1150 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 TTLL4Q14679 1199 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 MAP4K3Q8IVH8 894 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 ACRBPQ8NEB7 543 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 ZNF397Q8NF99 534 aaPredicted RBP22.77■■□□□ 1.24
SQLE-206ENST00000523430 SCFD2Q8WU76 684 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 BAP1Q92560 729 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 TMEM143Q96AN5 459 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 PCIF1Q9H4Z3 704 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 DHX33Q9H6R0 707 aaKnown RBP22.77■■□□□ 1.24
SQLE-206ENST00000523430 FRMD4BQ9Y2L6 1034 aa22.77■■□□□ 1.24
SQLE-206ENST00000523430 ADGRA2Q96PE1 1338 aa22.76■■□□□ 1.23
SQLE-206ENST00000523430 A0A0U1RQJ8 604 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms