RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 CDC25BP30305 580 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 HOXD13P35453 343 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 COPB1P53618 953 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 PEX3P56589 373 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 IRX5P78411 483 aaPredicted RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 LRRC63Q05C16 580 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 SPAG1Q07617 926 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 KCNA1Q09470 495 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 IRF5Q13568 498 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 KCNJ12Q14500 433 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 MFSD10Q14728 455 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 KRT31Q15323 416 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 TARBP2Q15633 366 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 PTPN21Q16825 1174 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 KNOP1Q1ED39 458 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 LRRC55Q6ZSA7 311 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 STXBP4Q6ZWJ1 553 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 PLPPR4Q7Z2D5 763 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 APTXQ7Z2E3 356 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 ZNF720Q7Z2F6 126 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 CREBRFQ8IUR6 639 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 DRC7Q8IY82 874 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 MCPH1Q8NEM0 835 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 PPTC7Q8NI37 304 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 ZNF507Q8TCN5 953 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 ATP8B4Q8TF62 1192 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 TRAPPC12Q8WVT3 735 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 TRIB2Q92519 343 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 TMEM143Q96AN5 459 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 EEF2KMTQ96G04 330 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 CNOT6LQ96LI5 555 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 IKZF4Q9H2S9 585 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 SMARCAD1Q9H4L7 1026 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 DHX33Q9H6R0 707 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 SLC24A3Q9HC58 644 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 PDLIM7Q9NR12 457 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 INTS13Q9NVM9 706 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 LARSQ9P2J5 1176 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 MAGEC2Q9UBF1 373 aaPredicted RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 TRPC6Q9Y210 931 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 GNEQ9Y223 722 aaKnown RBP7.41□□□□□ -1.22
PVT1-217ENST00000523190 UBE4BO95155 1302 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 ZMYM2Q9UBW7 1377 aa7.41□□□□□ -1.22
PVT1-217ENST00000523190 MYH9P35579 1960 aaKnown RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 CCDC169A6NNP5 214 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 GPR25O00155 361 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 SLC16A4O15374 487 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TGFB1I1O43294 461 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 CALUO43852 315 aaPredicted RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 HBP1O60381 514 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 MAFO75444 373 aaPredicted RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 MAPTP10636 758 aaKnown RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 CYBAP13498 195 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 RFC5P40937 340 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 NPTX2P47972 431 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 SLC26A2P50443 739 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 NCKAP1LP55160 1127 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TRIM32Q13049 653 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 EDRF1Q3B7T1 1238 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TCP11X2Q5H9J9 407 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 MFSD14CQ5VZR4 134 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 FOXR2Q6PJQ5 311 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TMC6Q7Z403 805 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 HAUS6Q7Z4H7 955 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TLK2Q86UE8 772 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 FAM114A1Q8IWE2 563 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TRPV1Q8NER1 839 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 ANKRD20A12PQ8NF67 263 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 ASAP3Q8TDY4 903 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 SLC7A3Q8WY07 619 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 KIFAP3Q92845 792 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 C16orf70Q9BSU1 422 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 KIFC3Q9BVG8 833 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 STRA6Q9BX79 667 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 VPS16Q9H269 839 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 RNPEPQ9H4A4 650 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 TYW1Q9NV66 732 aaKnown RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 ERAP1Q9NZ08 941 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 LIMA1Q9UHB6 759 aaKnown RBP7.4□□□□□ -1.22
PVT1-217ENST00000523190 FAM184BQ9ULE4 1060 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 PPME1Q9Y570 386 aa7.4□□□□□ -1.22
PVT1-217ENST00000523190 MYH11P35749 1972 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 ADGRA3Q8IWK6 1321 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 A0A1B0GTH6 734 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 H3BRB1 525 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 PDXKO00764 312 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 N4BP3O15049 544 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 CLIC2O15247 247 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 TEX33O43247 280 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 FGFR1OPO95684 399 aaKnown RBP7.39□□□□□ -1.23
PVT1-217ENST00000523190 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
PVT1-217ENST00000523190 HOXD8P13378 290 aaPredicted RBP7.39□□□□□ -1.23
PVT1-217ENST00000523190 AKR1A1P14550 325 aa7.39□□□□□ -1.23
PVT1-217ENST00000523190 INSRRP14616 1297 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms