RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 WNT7AO00755 349 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 FAM102BQ5T8I3 360 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 IL27Q8NEV9 243 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 P2RX5Q93086 422 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 LMAN2LQ9H0V9 348 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
VEGFA-223ENST00000523125 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
VEGFA-223ENST00000523125 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
VEGFA-223ENST00000523125 ITGB1P05556 798 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-223ENST00000523125 FGFR4P22455 802 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 DNAJB1P25685 340 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 FOSBP53539 338 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
VEGFA-223ENST00000523125 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
VEGFA-223ENST00000523125 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 TMEM161AQ9NX61 479 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
VEGFA-223ENST00000523125 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
VEGFA-223ENST00000523125 FGFR1P11362 822 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 KCNA5P22460 613 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 NPEPPSP55786 919 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 EPHA7Q15375 998 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
VEGFA-223ENST00000523125 KLHL23Q8NBE8 558 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-223ENST00000523125 SPPL3Q8TCT6 385 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
VEGFA-223ENST00000523125 BRMS1Q9HCU9 246 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-223ENST00000523125 RGL1Q9NZL6 768 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 HCSTQ9UBK5 93 aa13.88□□□□□ -0.19
VEGFA-223ENST00000523125 A0A087WZ62 844 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 ZBTB39O15060 712 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 LTBRP36941 435 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 DNM2P50570 870 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 HYAL1Q12794 435 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 NCAPH2Q6IBW4 605 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 KSR1Q8IVT5 923 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 C4orf19Q8IY42 314 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 NEK9Q8TD19 979 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 NLRP7Q8WX94 980 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 FDXACB1Q9BRP7 624 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-223ENST00000523125 LXNQ9BS40 222 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
VEGFA-223ENST00000523125 CWH43Q9H720 699 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
VEGFA-223ENST00000523125 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
VEGFA-223ENST00000523125 SUCLA2Q9P2R7 463 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-223ENST00000523125 A0A0U1RQF3 1178 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 MARCH6O60337 910 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 DKC1O60832 514 aaKnown RBP eCLIP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 SLITRK3O94933 977 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 BAG4O95429 457 aaKnown RBP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 GTF2F1P35269 517 aaKnown RBP eCLIP13.86□□□□□ -0.193e-11■■■■■ 42.3
VEGFA-223ENST00000523125 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 TRIM29Q14134 588 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 LRRC55Q6ZSA7 311 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 SCLT1Q96NL6 688 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 CASD1Q96PB1 797 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 MTMR9Q96QG7 549 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 LLPHQ9BRT6 129 aaKnown RBP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-223ENST00000523125 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 PCDHA12Q9UN75 941 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 TRIOO75962 3097 aa13.86□□□□□ -0.19
VEGFA-223ENST00000523125 H3BQ06 376 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-223ENST00000523125 ATF7P17544 494 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-223ENST00000523125 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
VEGFA-223ENST00000523125 IRS1P35568 1242 aa13.85□□□□□ -0.19
VEGFA-223ENST00000523125 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
VEGFA-223ENST00000523125 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
VEGFA-223ENST00000523125 CALCRLQ16602 461 aa13.85□□□□□ -0.19
VEGFA-223ENST00000523125 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
VEGFA-223ENST00000523125 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
VEGFA-223ENST00000523125 PRPF31Q8WWY3 499 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms