RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 DHX33Q9H6R0 707 aaKnown RBP16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 PPP1R37O75864 691 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 GJB1P08034 283 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 BEX3Q00994 111 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 LRRC63Q05C16 580 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 HAUS6Q7Z4H7 955 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 TLK2Q86UE8 772 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 BBXQ8WY36 941 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 EMID1Q96A84 441 aaPredicted RBP16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 STRA6Q9BX79 667 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 SMARCAD1Q9H4L7 1026 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
CSGALNACT1-211ENST00000522854 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 MKRN4PQ13434 485 aaPredicted RBP16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 NR1I3Q14994 352 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 CCDC186Q7Z3E2 898 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 SLC7A3Q8WY07 619 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 TSG101Q99816 390 aa16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 LIMA1Q9UHB6 759 aaKnown RBP16.59■□□□□ 0.25
CSGALNACT1-211ENST00000522854 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 NR2F2P24468 414 aa16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 MAP2K2P36507 400 aa16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 MCPH1Q8NEM0 835 aa16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 ERAP1Q9NZ08 941 aa16.58■□□□□ 0.25
CSGALNACT1-211ENST00000522854 MYADML2A6NDP7 307 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 H3BRB1 525 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 N4BP3O15049 544 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 GLRA2P23416 452 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CNGA1P29973 690 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CDC25BP30305 580 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CASP4P49662 377 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 NCKAP1LP55160 1127 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TBC1D8BQ0IIM8 1120 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 ADAM9Q13443 819 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TMEM161BQ8NDZ6 487 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 ZSWIM2Q8NEG5 633 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TUT1Q9H6E5 874 aaKnown RBP16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KMT5AQ9NQR1 393 aa16.58■□□□□ 0.24
CSGALNACT1-211ENST00000522854 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PPFIA4O75335 1185 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 INSRRP14616 1297 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KIFAP3Q92845 792 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TIPINQ9BVW5 301 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 RTN4Q9NQC3 1192 aaKnown RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TYW1Q9NV66 732 aaKnown RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 MAGEC2Q9UBF1 373 aaPredicted RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TRAF3IP3Q9Y228 551 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PCDHB13Q9Y5F0 798 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 GPR25O00155 361 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KIF20AO95235 890 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 NR3C1P04150 777 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 XRCC5P13010 732 aaKnown RBP16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CYBAP13498 195 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CLCN3P51790 818 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 LRMPQ12912 555 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 DGKDQ16760 1214 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 MIIPQ5JXC2 388 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 VSTM4Q8IW00 320 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 FAM167AQ96KS9 214 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PPP1R16BQ96T49 567 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PCIF1Q9H4Z3 704 aa16.57■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KAT6AQ92794 2004 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PDXKO00764 312 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CBFA2T2O43439 604 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 AKAP3O75969 853 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 EEF1GP26641 437 aaKnown RBP16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 ARL2P36404 184 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CYP2J2P51589 502 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 GTF2BQ00403 316 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CACNB2Q08289 660 aaPredicted RBP16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KIF22Q14807 665 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 TAS1R3Q7RTX0 852 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 METTL13Q8N6R0 699 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 KCNF1Q9H3M0 494 aa16.56■□□□□ 0.24
CSGALNACT1-211ENST00000522854 AGPAT3Q9NRZ7 376 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms