RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SOX5P35711 763 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 KCNJ6P48051 423 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 STAT5BP51692 787 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 IQGAP3Q86VI3 1631 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 TRAPPC3O43617 180 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 SKIV2LQ15477 1246 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 RABL6Q3YEC7 729 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 PPP6R3Q5H9R7 873 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 ADAMTS1Q9UHI8 967 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 STK38LQ9Y2H1 464 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 SART1O43290 800 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 GCLMP48507 274 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 SLMAPQ14BN4 828 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 TJP3O95049 919 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 KNOP1Q1ED39 458 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 TTC13Q8NBP0 860 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 RBM41Q96IZ5 413 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 CALR3Q96L12 384 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 GGA3Q9NZ52 723 aa17.42■□□□□ 0.38
PCDHA3-201ENST00000522353 ANGEL2Q5VTE6 544 aaKnown RBP17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 NUDT18Q6ZVK8 323 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 VSTM4Q8IW00 320 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 NDUFA10O95299 355 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 FTCDO95954 541 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 PAMP19021 973 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 TMEM270Q6UE05 265 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 CHAMP1Q96JM3 812 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 INTS9Q9NV88 658 aaKnown RBP17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 TMEM260Q9NX78 707 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 ZNF70Q9UC06 446 aaPredicted RBP17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 PYCARDQ9ULZ3 195 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 KIF3CO14782 793 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 SDC4P31431 198 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 SEMA3FQ13275 785 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 KRT31Q15323 416 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 PCDHA13Q9Y5I0 950 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 NEMP1O14524 444 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 COASYQ13057 564 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 PANX2Q96RD6 677 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 GLI2P10070 1586 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 SUN1O94901 812 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 MT-ND3P03897 115 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 CPB1P15086 417 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
PCDHA3-201ENST00000522353 UBE4BO95155 1302 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 MIF4GDA9UHW6 222 aaKnown RBP17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 KLC3Q6P597 504 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 LBHD1Q9BQE6 289 aaPredicted RBP17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 KLC2Q9H0B6 622 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 SLC25A27O95847 323 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 KIAA1755Q5JYT7 1200 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 HSPH1Q92598 858 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 CEP72Q9P209 647 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 FAN1Q9Y2M0 1017 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 KIAA0391O15091 583 aaKnown RBP17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 LLGL1Q15334 1064 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 KRT39Q6A163 491 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 EPB41L5Q9HCM4 733 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 TTI1O43156 1089 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 TTC4O95801 387 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 CETPP11597 493 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 VAMP7P51809 220 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 HUNKP57058 714 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 ENOSF1Q7L5Y1 443 aa17.4■□□□□ 0.38
PCDHA3-201ENST00000522353 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.38
PCDHA3-201ENST00000522353 POTEFA5A3E0 1075 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 RAD51Q06609 339 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 AFG1LQ8WV93 481 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 KIF28PB7ZC32 967 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 EVI5O60447 810 aa17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 ZRANB2O95218 330 aaKnown RBP eCLIP17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
PCDHA3-201ENST00000522353 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms