RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MMP1P03956 469 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
SDCBP-209ENST00000522243 IL9P15248 144 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 DNAJB1P25685 340 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 PSMC5P62195 406 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 PPP2R5CQ13362 524 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 SPPL3Q8TCT6 385 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 HAS1Q92839 578 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 PABPC5Q96DU9 382 aaKnown RBP23.25■■□□□ 1.31
SDCBP-209ENST00000522243 FAM20AQ96MK3 541 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 ATP6V0A4Q9HBG4 840 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 TMEM161AQ9NX61 479 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 BRWD1Q9NSI6 2320 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 DARSP14868 501 aaKnown RBP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 ZSCAN20P17040 1043 aaPredicted RBP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 FAM189BP81408 668 aa23.24■■□□□ 1.31
SDCBP-209ENST00000522243 HYAL1Q12794 435 aa23.24■■□□□ 1.31
SDCBP-209ENST00000522243 PTCRAQ6ISU1 281 aaPredicted RBP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 FAM43BQ6ZT52 329 aaPredicted RBP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 ANO5Q75V66 913 aa23.24■■□□□ 1.31
SDCBP-209ENST00000522243 NEK9Q8TD19 979 aa23.24■■□□□ 1.31
SDCBP-209ENST00000522243 IGFLR1Q9H665 355 aa23.24■■□□□ 1.31
SDCBP-209ENST00000522243 RNF216Q9NWF9 866 aaPredicted RBP23.24■■□□□ 1.31
SDCBP-209ENST00000522243 IGKV6-21A0A0C4DH24 114 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 EIF5BO60841 1220 aaKnown RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 IRS1P35568 1242 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 QARSP47897 775 aaKnown RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 NAALADL2Q58DX5 795 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 ZNF710Q8N1W2 664 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 POF1BQ8WVV4 589 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 TNFRSF25Q93038 417 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 NAP1L4Q99733 375 aaKnown RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 ELAC1Q9H777 363 aaKnown RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 BRMS1Q9HCU9 246 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 TYW1Q9NV66 732 aaKnown RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 WRAP73Q9P2S5 460 aaPredicted RBP23.23■■□□□ 1.31
SDCBP-209ENST00000522243 TTC28Q96AY4 2481 aa23.23■■□□□ 1.31
SDCBP-209ENST00000522243 A0A087WZ62 844 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 MAFO75444 373 aaPredicted RBP23.22■■□□□ 1.31
SDCBP-209ENST00000522243 NPEPPSP55786 919 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 ST3GAL1Q11201 340 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 NCAPH2Q6IBW4 605 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 RHPN2Q8IUC4 686 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 ZNF579Q8NAF0 562 aaKnown RBP23.22■■□□□ 1.31
SDCBP-209ENST00000522243 RNF169Q8NCN4 708 aa23.22■■□□□ 1.31
SDCBP-209ENST00000522243 FDXACB1Q9BRP7 624 aaPredicted RBP23.22■■□□□ 1.31
SDCBP-209ENST00000522243 GCOM2Q9BZD3 368 aaPredicted RBP23.22■■□□□ 1.31
SDCBP-209ENST00000522243 SUCLA2Q9P2R7 463 aaPredicted RBP23.22■■□□□ 1.31
SDCBP-209ENST00000522243 BTBD18B2RXH4 712 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 TBX3O15119 743 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 LTBRP36941 435 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 DNM2P50570 870 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 COL19A1Q14993 1142 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 ADGRD2Q7Z7M1 963 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 ECHDC2Q86YB7 292 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 KSR1Q8IVT5 923 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 CD320Q9NPF0 282 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 CYP26B1Q9NR63 512 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 RNF19AQ9NV58 838 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 RGL1Q9NZL6 768 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 PCDHB12Q9Y5F1 795 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 PCDHGC5Q9Y5F6 944 aa23.21■■□□□ 1.31
SDCBP-209ENST00000522243 GRXCR2A6NFK2 248 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 LINC01565O15544 149 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 P4HBP07237 508 aaKnown RBP23.2■■□□□ 1.3
SDCBP-209ENST00000522243 DLX2Q07687 328 aaPredicted RBP23.2■■□□□ 1.3
SDCBP-209ENST00000522243 EPHA7Q15375 998 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 CLUL1Q15846 466 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 DYDC2Q96IM9 177 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 CEP170P1Q96L14 293 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 CASD1Q96PB1 797 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 TMEM117Q9H0C3 514 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 CWH43Q9H720 699 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 AAASQ9NRG9 546 aa23.2■■□□□ 1.3
SDCBP-209ENST00000522243 BMP2KQ9NSY1 1161 aaPredicted RBP23.2■■□□□ 1.3
SDCBP-209ENST00000522243 XIRP2A4UGR9 3374 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 DKC1O60832 514 aaKnown RBP eCLIP23.19■■□□□ 1.3
SDCBP-209ENST00000522243 BAG4O95429 457 aaKnown RBP23.19■■□□□ 1.3
SDCBP-209ENST00000522243 CYP4A11Q02928 519 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 CTTNQ14247 550 aaKnown RBP23.19■■□□□ 1.3
SDCBP-209ENST00000522243 CTC1Q2NKJ3 1217 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 LRRC55Q6ZSA7 311 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 FAM178BQ8IXR5 827 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 DIS3L2Q8IYB7 885 aaKnown RBP23.19■■□□□ 1.3
SDCBP-209ENST00000522243 COLGALT1Q8NBJ5 622 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 KHSRPQ92945 711 aaKnown RBP eCLIP23.19■■□□□ 1.3
SDCBP-209ENST00000522243 NLRP4Q96MN2 994 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 LXNQ9BS40 222 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 EPHX3Q9H6B9 360 aa23.19■■□□□ 1.3
SDCBP-209ENST00000522243 WNT7AO00755 349 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 NCK2O43639 380 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 CDC42EP1Q00587 391 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 GUCY1B3Q02153 619 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 SPIRE1Q08AE8 756 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 TRIM29Q14134 588 aa23.18■■□□□ 1.3
SDCBP-209ENST00000522243 RBM23Q86U06 439 aaKnown RBP23.18■■□□□ 1.3
SDCBP-209ENST00000522243 SLFN12Q8IYM2 578 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms