RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 BANK1Q8NDB2 785 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 SLC9A7Q96T83 725 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 PBX4Q9BYU1 374 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TRIM5Q9C035 493 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TMEM60Q9H2L4 133 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 FOXP1Q9H334 677 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 CBX8Q9HC52 389 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 SEPT9Q9UHD8 586 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 YBX2Q9Y2T7 364 aaKnown RBP7.6□□□□□ -1.19
SPIDR-218ENST00000522222 PAXBP1Q9Y5B6 917 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 PCDHA2Q9Y5H9 948 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 TRPV2Q9Y5S1 764 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 CDY2AQ9Y6F7 541 aa7.6□□□□□ -1.19
SPIDR-218ENST00000522222 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 BECN2A8MW95 431 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 CCP110O43303 1012 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 MARCH6O60337 910 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 LIG1P18858 919 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 KLRC1P26715 233 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 MCM7P33993 719 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 KCNJ6P48051 423 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 CLCN3P51790 818 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 ZNF75DP51815 510 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 TMEM62Q0P6H9 643 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 GNL2Q13823 731 aaKnown RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 LPIN1Q14693 890 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 RAB30Q15771 203 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 PLEKHG4Q58EX7 1191 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 FBXO47Q5MNV8 452 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 TTC38Q5R3I4 469 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 PLA2G4FQ68DD2 849 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 DRC7Q8IY82 874 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 SLFN12Q8IYM2 578 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 DBF4BQ8NFT6 615 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 MRPS27Q92552 414 aaKnown RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 SEPT8Q92599 483 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 TIFAQ96CG3 184 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 PPP1R16BQ96T49 567 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 BPIFA3Q9BQP9 254 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 LXNQ9BS40 222 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 IFIH1Q9BYX4 1025 aaKnown RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 NKX2-4Q9H2Z4 354 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 TTYH1Q9H313 450 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 MTMR10Q9NXD2 777 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 FAM13BQ9NYF5 915 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 WRAP73Q9P2S5 460 aaPredicted RBP7.59□□□□□ -1.19
SPIDR-218ENST00000522222 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 ARID2Q68CP9 1835 aa7.59□□□□□ -1.19
SPIDR-218ENST00000522222 TMEM265A0A087WTH1 108 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 ABHD14A-ACY1A0A1B0GW23 586 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 SMTNL1A8MU46 457 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 M0QZ92 97 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 EFCAB14O75071 495 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 STBD1O95210 358 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 VTNP04004 478 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 RPLP2P05387 115 aaKnown RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 OR52Z1P0C646 297 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 MYOGP15173 224 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 U2AF2P26368 475 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 QARSP47897 775 aaKnown RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 TRAPPC10P48553 1259 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 PSMC5P62195 406 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 CYP4A11Q02928 519 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 ORC2Q13416 577 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 TARBP2Q15633 366 aaKnown RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 ZNF174Q15697 407 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 MTERF2Q49AM1 385 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 XKR3Q5GH77 459 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 ADALQ6DHV7 355 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 TSHZ1Q6ZSZ6 1077 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 TMCO2Q7Z6W1 182 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 HERC6Q8IVU3 1022 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 KIAA0319LQ8IZA0 1049 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 LRRC71Q8N4P6 559 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 METTL13Q8N6R0 699 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 LINC01465Q8N7H1 131 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 GUCD1Q96NT3 240 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 MTMR9Q96QG7 549 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 TTC12Q9H892 705 aaPredicted RBP7.58□□□□□ -1.2
SPIDR-218ENST00000522222 KCND1Q9NSA2 647 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 RGL1Q9NZL6 768 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 MSRAQ9UJ68 235 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 CEP131Q9UPN4 1083 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 PCDHA11Q9Y5I1 949 aa7.58□□□□□ -1.2
SPIDR-218ENST00000522222 COL4A4P53420 1690 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-218ENST00000522222 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 MAGEB2O15479 319 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 NR1I2O75469 434 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 ARHGEF15O94989 841 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 CA3P07451 260 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 CD52P31358 61 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 TXKP42681 527 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 TOB1P50616 345 aaPredicted RBP7.57□□□□□ -1.2
SPIDR-218ENST00000522222 TBC1D8BQ0IIM8 1120 aa7.57□□□□□ -1.2
SPIDR-218ENST00000522222 DRP2Q13474 957 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms