RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MRC1P22897 1456 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 SSU72P8A0A1W2PR75 194 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 ZNF233A6NK53 670 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 GH2P01242 217 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 MT-ND3P03897 115 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 GARSP41250 739 aaKnown RBP14.85□□□□□ -0.03
SYNPO-205ENST00000522122 MIS18BP1Q6P0N0 1132 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 ERGIC2Q96RQ1 377 aa14.85□□□□□ -0.03
SYNPO-205ENST00000522122 FGFR2P21802 821 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 CA4P22748 312 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 GUCY2CP25092 1073 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 DYNLT1P63172 113 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 CDK17Q00537 523 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 DAGLBQ8NCG7 672 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 NEDD1Q8NHV4 660 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 TCHHQ07283 1943 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 MTERF2Q49AM1 385 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 USP17L10C9JJH3 530 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 EIF2AK2P19525 551 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 IGBP1P78318 339 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 SEC23AQ15436 765 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 NAALADL2Q58DX5 795 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 LRIG3Q6UXM1 1119 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 ELAC2Q9BQ52 826 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 TXLNGQ9NUQ3 528 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 HAUS2Q9NVX0 235 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 NXF1Q9UBU9 619 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 GPC5P78333 572 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 XXYLT1Q8NBI6 393 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 NACA2Q9H009 215 aa14.84□□□□□ -0.03
SYNPO-205ENST00000522122 DDX47Q9H0S4 455 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 DNAJC17Q9NVM6 304 aaKnown RBP14.84□□□□□ -0.03
SYNPO-205ENST00000522122 TDP2O95551 362 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 KLK7P49862 253 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 GDAP1Q8TB36 358 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 SCYL1Q96KG9 808 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 NBPF3Q9H094 633 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 EPN3Q9H201 632 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 BCS1LQ9Y276 419 aa14.83□□□□□ -0.03
SYNPO-205ENST00000522122 KIF1AQ12756 1690 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 LMO7Q8WWI1 1683 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 KIF3CO14782 793 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 MMEP08473 750 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 OPHN1O60890 802 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 GABPAQ06546 454 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 RCN2Q14257 317 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 E2F4Q16254 413 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 PDIK1LQ8N165 341 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 RIN2Q8WYP3 895 aaPredicted RBP14.83□□□□□ -0.04
SYNPO-205ENST00000522122 CNOT8Q9UFF9 292 aaKnown RBP14.83□□□□□ -0.04
SYNPO-205ENST00000522122 K7ERI5 159 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 TROAPQ12815 778 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 PKN1Q16512 942 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 BBS9Q3SYG4 887 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 GADL1Q6ZQY3 521 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 MSL3Q8N5Y2 521 aaKnown RBP14.83□□□□□ -0.04
SYNPO-205ENST00000522122 GBP7Q8N8V2 638 aaPredicted RBP14.83□□□□□ -0.04
SYNPO-205ENST00000522122 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.04
SYNPO-205ENST00000522122 POLD4Q9HCU8 107 aa14.83□□□□□ -0.04
SYNPO-205ENST00000522122 STXBP3O00186 592 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 CCND2P30279 289 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 FAM149B1Q96BN6 582 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 ANAPC7Q9UJX3 599 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 TLR3O15455 904 aaKnown RBP14.82□□□□□ -0.04
SYNPO-205ENST00000522122 MED7O43513 233 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 SAT1P21673 171 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 GCLMP48507 274 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 CACNB3P54284 484 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 DRP2Q13474 957 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 C12orf60Q5U649 245 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 PDCD7Q8N8D1 485 aaKnown RBP14.82□□□□□ -0.04
SYNPO-205ENST00000522122 SCINQ9Y6U3 715 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 POTEFA5A3E0 1075 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 SH3BP5O60239 455 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 PSAPP07602 524 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 NPR1P16066 1061 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 CD58P19256 250 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 BMP6P22004 513 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 PPP2R2AP63151 447 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 POTEGQ6S5H5 508 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 POTEEQ6S8J3 1075 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 CENPUQ71F23 418 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 Q9H521 79 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 SYNJ2BP-COX16A0A087WUM0 186 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 CPP00450 1065 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 MAGOHP61326 146 aaKnown RBP14.82□□□□□ -0.04
SYNPO-205ENST00000522122 RASIP1Q5U651 963 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 DARS2Q6PI48 645 aaKnown RBP14.82□□□□□ -0.04
SYNPO-205ENST00000522122 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 COX16Q9P0S2 106 aa14.82□□□□□ -0.04
SYNPO-205ENST00000522122 TRPC5Q9UL62 973 aaPredicted RBP14.82□□□□□ -0.04
SYNPO-205ENST00000522122 AFDNP55196 1824 aaKnown RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 RIC1Q4ADV7 1423 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms