RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
MRPS28-208ENST00000521605 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
MRPS28-208ENST00000521605 NAPAP54920 295 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 RBM10P98175 930 aaKnown RBP12.17□□□□□ -0.46
MRPS28-208ENST00000521605 LAMC2Q13753 1193 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 TMEM105Q8N8V8 129 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 PPTC7Q8NI37 304 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
MRPS28-208ENST00000521605 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 KCNH3Q9ULD8 1083 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 PCDHA6Q9UN73 950 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 PCDHA8Q9Y5H6 950 aa12.17□□□□□ -0.46
MRPS28-208ENST00000521605 RIF1Q5UIP0 2472 aaKnown RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 NUBP1P53384 320 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 EARS2Q5JPH6 523 aaKnown RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 KRBA2Q6ZNG9 492 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 REXO1Q8N1G1 1221 aaKnown RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 C4orf32Q8N8J7 132 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 TRIML1Q8N9V2 468 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 APBB2Q92870 758 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 EMID1Q96A84 441 aaPredicted RBP12.16□□□□□ -0.46
MRPS28-208ENST00000521605 AK8Q96MA6 479 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 PIGSQ96S52 555 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 DNAH14Q0VDD8 3507 aa12.16□□□□□ -0.46
MRPS28-208ENST00000521605 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SMCO2A6NFE2 343 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 PER2O15055 1255 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SLC26A4O43511 780 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 ITGB1P05556 798 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 GOLGA8HP0CJ92 632 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SMIM10L2AP0DMW4 78 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SMIM10L2BP0DMW5 78 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 CLK2P49760 499 aaKnown RBP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 CAMK4Q16566 473 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 ARHGEF16Q5VV41 709 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 PIK3AP1Q6ZUJ8 805 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SPATA20Q8TB22 786 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 CLP1Q92989 425 aaKnown RBP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 SPATA33Q96N06 139 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 PANK2Q9BZ23 570 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 RC3H2Q9HBD1 1191 aaKnown RBP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
MRPS28-208ENST00000521605 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 WDR87Q6ZQQ6 2873 aa12.15□□□□□ -0.46
MRPS28-208ENST00000521605 MYH7BA7E2Y1 1941 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 MYL1P05976 194 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
MRPS28-208ENST00000521605 ADCY7P51828 1080 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 PTGDRQ13258 359 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 PAN2Q504Q3 1202 aaKnown RBP12.14□□□□□ -0.47
MRPS28-208ENST00000521605 PPP4R3AQ6IN85 833 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 MOXD1Q6UVY6 613 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 DGLUCYQ7Z3D6 616 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 CKAP2LQ8IYA6 745 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 KLHL23Q8NBE8 558 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 SPPL3Q8TCT6 385 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 CUL5Q93034 780 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 RMDN1Q96DB5 314 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 SMOC2Q9H3U7 446 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 TLE6Q9H808 572 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
MRPS28-208ENST00000521605 DMXL1Q9Y485 3027 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 BAZ2BQ9UIF8 2168 aaKnown RBP12.13□□□□□ -0.47
MRPS28-208ENST00000521605 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 H3BRB1 525 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 EIF3JO75822 258 aaKnown RBP12.13□□□□□ -0.47
MRPS28-208ENST00000521605 GGPS1O95749 300 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 GHRP10912 638 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
MRPS28-208ENST00000521605 ATF7P17544 494 aaPredicted RBP12.13□□□□□ -0.47
MRPS28-208ENST00000521605 ZNF165P49910 485 aa12.13□□□□□ -0.47
MRPS28-208ENST00000521605 NLRP12P59046 1061 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms