RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PLVAPQ9BX97 442 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 CYP26B1Q9NR63 512 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 WRAP73Q9P2S5 460 aaPredicted RBP19.12■□□□□ 0.65
SQLE-205ENST00000521232 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 PPME1Q9Y570 386 aa19.12■□□□□ 0.65
SQLE-205ENST00000521232 BDP1A6H8Y1 2624 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 WNT7AO00755 349 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 BMP1P13497 986 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 SAFBQ15424 915 aaKnown RBP eCLIP19.11■□□□□ 0.65
SQLE-205ENST00000521232 CALCRLQ16602 461 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 NCAPH2Q6IBW4 605 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 C8orf76Q96K31 380 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 ZNF668Q96K58 619 aaPredicted RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 MTMR9Q96QG7 549 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 C11orf84Q9BUA3 381 aaPredicted RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 ELAC1Q9H777 363 aaKnown RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 RGL1Q9NZL6 768 aa19.11■□□□□ 0.65
SQLE-205ENST00000521232 SUCLA2Q9P2R7 463 aaPredicted RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 MRPL42Q9Y6G3 142 aaKnown RBP19.11■□□□□ 0.65
SQLE-205ENST00000521232 FNDC1Q4ZHG4 1894 aaPredicted RBP19.1■□□□□ 0.65
SQLE-205ENST00000521232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.1■□□□□ 0.65
SQLE-205ENST00000521232 SLITRK3O94933 977 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 ZSCAN20P17040 1043 aaPredicted RBP19.1■□□□□ 0.65
SQLE-205ENST00000521232 NPEPPSP55786 919 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 GUCY1B3Q02153 619 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 NAALADL2Q58DX5 795 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 PLA2G4FQ68DD2 849 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 EXOC8Q8IYI6 725 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
SQLE-205ENST00000521232 FBXO18Q8NFZ0 1043 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 NLRP7Q8WX94 980 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 P2RX5Q93086 422 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 DYDC2Q96IM9 177 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 LXNQ9BS40 222 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 LMAN2LQ9H0V9 348 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 ZSWIM4Q9H7M6 989 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 TMEM161AQ9NX61 479 aa19.1■□□□□ 0.65
SQLE-205ENST00000521232 TCF20Q9UGU0 1960 aaKnown RBP19.1■□□□□ 0.65
SQLE-205ENST00000521232 NEMFO60524 1076 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 YWHABP31946 246 aaKnown RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 GATMP50440 423 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 RABEP1Q15276 862 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 PAN2Q504Q3 1202 aaKnown RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 TIGD5Q53EQ6 642 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 FAM102BQ5T8I3 360 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 OTUD6AQ7L8S5 288 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 ZNF410Q86VK4 478 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 IL27Q8NEV9 243 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 CEP170P1Q96L14 293 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 HSD17B14Q9BPX1 270 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 GCOM2Q9BZD3 368 aaPredicted RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 FOXP1Q9H334 677 aaPredicted RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 DHX33Q9H6R0 707 aaKnown RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 TTC12Q9H892 705 aaPredicted RBP19.09■□□□□ 0.65
SQLE-205ENST00000521232 ATP6V0A4Q9HBG4 840 aa19.09■□□□□ 0.65
SQLE-205ENST00000521232 A0A087WZ62 844 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 GRM6O15303 877 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 RFC5P40937 340 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 TXKP42681 527 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 CTTNQ14247 550 aaKnown RBP19.08■□□□□ 0.64
SQLE-205ENST00000521232 RHPN2Q8IUC4 686 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 SLC7A3Q8WY07 619 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 SCLT1Q96NL6 688 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 EIF2AK1Q9BQI3 630 aaKnown RBP19.08■□□□□ 0.64
SQLE-205ENST00000521232 FDXACB1Q9BRP7 624 aaPredicted RBP19.08■□□□□ 0.64
SQLE-205ENST00000521232 INO80BQ9C086 356 aaPredicted RBP19.08■□□□□ 0.64
SQLE-205ENST00000521232 PLAGL2Q9UPG8 496 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 KIAA1671Q9BY89 1806 aa19.08■□□□□ 0.64
SQLE-205ENST00000521232 ZBTB39O15060 712 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 LYPLA2O95372 231 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 IBSPP21815 317 aaPredicted RBP19.07■□□□□ 0.64
SQLE-205ENST00000521232 FGFR4P22455 802 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 KCNQ1P51787 676 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 CYP4A11Q02928 519 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 TPH2Q8IWU9 490 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 FAM184AQ8NB25 1140 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 ADAMTS19Q8TE59 1207 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 TMEM60Q9H2L4 133 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 NSUN3Q9H649 340 aaKnown RBP19.07■□□□□ 0.64
SQLE-205ENST00000521232 UBE2ZQ9H832 354 aaPredicted RBP19.07■□□□□ 0.64
SQLE-205ENST00000521232 CHST12Q9NRB3 414 aa19.07■□□□□ 0.64
SQLE-205ENST00000521232 A0A0U1RQF3 1178 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 TBKBP1A7MCY6 615 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 CSDE1O75534 798 aaKnown RBP19.06■□□□□ 0.64
SQLE-205ENST00000521232 POLGP54098 1239 aaPredicted RBP19.06■□□□□ 0.64
SQLE-205ENST00000521232 ORC2Q13416 577 aaPredicted RBP19.06■□□□□ 0.64
SQLE-205ENST00000521232 TCEAL5Q5H9L2 206 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 ECHDC2Q86YB7 292 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 KSR1Q8IVT5 923 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 KLHL23Q8NBE8 558 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 SPPL3Q8TCT6 385 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 NEK9Q8TD19 979 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 ALG13Q9NP73 1137 aaKnown RBP19.06■□□□□ 0.64
SQLE-205ENST00000521232 ATG2AQ2TAZ0 1938 aa19.06■□□□□ 0.64
SQLE-205ENST00000521232 HOXA2O43364 376 aa19.05■□□□□ 0.64
SQLE-205ENST00000521232 GAS2O43903 313 aaKnown RBP19.05■□□□□ 0.64
SQLE-205ENST00000521232 ST18O60284 1047 aa19.05■□□□□ 0.64
SQLE-205ENST00000521232 EOMESO95936 686 aa19.05■□□□□ 0.64
SQLE-205ENST00000521232 ITGB1P05556 798 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms