RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CYP4A11Q02928 519 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 FOXD4L6Q3SYB3 417 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-222ENST00000520948 FOXD4L3Q6VB84 417 aaPredicted RBP20.28■□□□□ 0.84
VEGFA-222ENST00000520948 TPH2Q8IWU9 490 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 TRAPPC12Q8WVT3 735 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 OSBPL7Q9BZF2 842 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 LMCD1Q9NZU5 365 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 RCOR1Q9UKL0 485 aa20.28■□□□□ 0.84
VEGFA-222ENST00000520948 DDX11L8A8MPP1 907 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 PP2D1A8MPX8 630 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 ZBTB39O15060 712 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 PPP6R2O75170 966 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 AMHP03971 560 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 XRCC6P12956 609 aaKnown RBP eCLIP20.27■□□□□ 0.841e-10■□□□□ 8.5
VEGFA-222ENST00000520948 CDC25AP30304 524 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 LONP1P36776 959 aaKnown RBP20.27■□□□□ 0.84
VEGFA-222ENST00000520948 MKRN4PQ13434 485 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-222ENST00000520948 ECM1Q16610 540 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 ERMNQ8TAM6 284 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 AK8Q96MA6 479 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 INSL6Q9Y581 213 aa20.27■□□□□ 0.84
VEGFA-222ENST00000520948 TMEM150BA6NC51 233 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 SPTLC2O15270 562 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 KLRC1P26715 233 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 HYIQ5T013 277 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 MTHFD1LQ6UB35 978 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 TRMT1LQ7Z2T5 733 aaKnown RBP20.26■□□□□ 0.83
VEGFA-222ENST00000520948 RPAINQ86UA6 219 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 FBXO22Q8NEZ5 403 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 KHSRPQ92945 711 aaKnown RBP eCLIP20.26■□□□□ 0.831e-9■■■□□ 15.1
VEGFA-222ENST00000520948 CHAMP1Q96JM3 812 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 IPO9Q96P70 1041 aaKnown RBP20.26■□□□□ 0.83
VEGFA-222ENST00000520948 UBE2ZQ9H832 354 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-222ENST00000520948 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
VEGFA-222ENST00000520948 TCHHQ07283 1943 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 BRWD1Q9NSI6 2320 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 YWHABP31946 246 aaKnown RBP20.25■□□□□ 0.83
VEGFA-222ENST00000520948 CCT6AP40227 531 aaKnown RBP20.25■□□□□ 0.83
VEGFA-222ENST00000520948 IGBP1P78318 339 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 STK38Q15208 465 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 HAUS3Q68CZ6 603 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 ZNF579Q8NAF0 562 aaKnown RBP20.25■□□□□ 0.83
VEGFA-222ENST00000520948 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 CLIC6Q96NY7 704 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 ANKEF1Q9NU02 776 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 TUBE1Q9UJT0 475 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 PCDHA2Q9Y5H9 948 aa20.25■□□□□ 0.83
VEGFA-222ENST00000520948 IGKV6-21A0A0C4DH24 114 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 SLC26A4O43511 780 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 UPP2O95045 317 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 C22orf31O95567 290 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 HTRA4P83105 476 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-222ENST00000520948 KRT79Q5XKE5 535 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 RUFY4Q6ZNE9 571 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 OTUD6AQ7L8S5 288 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 LINC01465Q8N7H1 131 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 KRI1Q8N9T8 703 aaKnown RBP20.24■□□□□ 0.83
VEGFA-222ENST00000520948 SNX29Q8TEQ0 813 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 SEPT8Q92599 483 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 CYP26B1Q9NR63 512 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 SEPT9Q9UHD8 586 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-222ENST00000520948 PPME1Q9Y570 386 aa20.24■□□□□ 0.83
VEGFA-222ENST00000520948 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 A0A087WWV3 80 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 SMIM35A0A1B0GVV1 85 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 MAGEB2O15479 319 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 KCNA5P22460 613 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 PLA2G5P39877 138 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 NPEPPSP55786 919 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 AXDND1Q5T1B0 1012 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-222ENST00000520948 PLA2G4FQ68DD2 849 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 TAF2Q6P1X5 1199 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 KCTD17Q8N5Z5 321 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 SP7Q8TDD2 431 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-222ENST00000520948 PIGOQ8TEQ8 1089 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 PNMA5Q96PV4 448 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 NACC1Q96RE7 527 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 SH2D3AQ9BRG2 576 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 LRFN3Q9BTN0 628 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 CCSER1Q9C0I3 900 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 CD320Q9NPF0 282 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
VEGFA-222ENST00000520948 DBR1Q9UK59 544 aaKnown RBP20.23■□□□□ 0.83
VEGFA-222ENST00000520948 EVPLQ92817 2033 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 MAFO75444 373 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-222ENST00000520948 KRT85P78386 507 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 MTERF2Q49AM1 385 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 POTEGQ6S5H5 508 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 KCNG4Q8TDN1 519 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 FAM122AQ96E09 287 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 DHX33Q9H6R0 707 aaKnown RBP20.22■□□□□ 0.83
VEGFA-222ENST00000520948 KIAA1024Q9UPX6 916 aa20.22■□□□□ 0.83
VEGFA-222ENST00000520948 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-222ENST00000520948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms