RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 TRIM60Q495X7 471 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 PLA2G4FQ68DD2 849 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 KRBA2Q6ZNG9 492 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 KIAA0319LQ8IZA0 1049 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 SPIRE2Q8WWL2 714 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 DHX58Q96C10 678 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 NOC4LQ9BVI4 516 aaKnown RBP7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 INO80BQ9C086 356 aaPredicted RBP7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 ST6GALNAC4Q9H4F1 302 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRMT13Q9NUP7 481 aaKnown RBP7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 SEL1LQ9UBV2 794 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 COL4A3BPQ9Y5P4 624 aa7.06□□□□□ -1.28
IGHV4-55-201ENST00000520889 GTPBP6O43824 516 aaPredicted RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PQBP1O60828 265 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 KINO60870 393 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 GPR32O75388 356 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TIMP1P01033 207 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CKBP12277 381 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 SELPP16109 830 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 MCM4P33991 863 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 NAMPTP43490 491 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 GPC3P51654 580 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 EFNA5P52803 228 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CRYBB1P53674 252 aaPredicted RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 ATN1P54259 1190 aaPredicted RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 IGBP1P78318 339 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 MRPS6P82932 125 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 MGAT3Q09327 533 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PSMD2Q13200 908 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 ALCAMQ13740 583 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 GIT2Q14161 759 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 MCM6Q14566 821 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 ZRSR1Q15695 479 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 LONRF3Q496Y0 759 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 ARSHQ5FYA8 562 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 UNC13DQ70J99 1090 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 SRGAP1Q7Z6B7 1085 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 GPBP1Q86WP2 473 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PDILTQ8N807 584 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CNNM3Q8NE01 707 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRAPPC12Q8WVT3 735 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 DHX38Q92620 1227 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 HVCN1Q96D96 273 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 DNAJC19Q96DA6 116 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PAGE5Q96GU1 130 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 IFT74Q96LB3 600 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PRIMPOLQ96LW4 560 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 RUSC1Q9BVN2 902 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CELF4Q9BZC1 486 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRIM9Q9C026 710 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRPV6Q9H1D0 765 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 C2orf40Q9H1Z8 148 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 GOLPH3LQ9H4A5 285 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TMEM134Q9H6X4 195 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 OLFML3Q9NRN5 406 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TMEM39AQ9NV64 488 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 LARSQ9P2J5 1176 aaKnown RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 SUCLA2Q9P2R7 463 aaPredicted RBP7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 PRKAG2Q9UGJ0 569 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 SERTAD1Q9UHV2 236 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRPV2Q9Y5S1 764 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 NR2E3Q9Y5X4 410 aa7.05□□□□□ -1.28
IGHV4-55-201ENST00000520889 CENPFP49454 3210 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 TMEM150BA6NC51 233 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 MYMKA6NI61 221 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 RSPH10B2B2RC85 870 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 EVI5O60447 810 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 HIP1RO75146 1068 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 GADD45BO75293 160 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 TBCAO75347 108 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 CXCL10P02778 98 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 KRT18P05783 430 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 IQCF3P0C7M6 154 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 RSPH10BP0C881 870 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PLS3P13797 630 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 GLRA2P23416 452 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 EIF4BP23588 611 aaKnown RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PHKA2P46019 1235 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 CLCN3P51790 818 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 SMTNP53814 917 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 CHMP4BP1P59074 171 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 PTENP60484 403 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 ZNF200P98182 395 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 EHHADHQ08426 723 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 LAMTOR4Q0VGL1 99 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 MAPK7Q13164 816 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 KCNB1Q14721 858 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 FAM187BQ17R55 369 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 SKOR2Q2VWA4 1001 aaPredicted RBP7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 NT5DC1Q5TFE4 455 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 TRAF7Q6Q0C0 670 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 LRRC8DQ7L1W4 858 aa7.04□□□□□ -1.28
IGHV4-55-201ENST00000520889 CCDC65Q8IXS2 484 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms