RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 BAP1Q92560 729 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 CBWD1Q9BRT8 395 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 EMSYQ7Z589 1322 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 DENND3A2RUS2 1198 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 VWA5AO00534 786 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 PPP2R5CQ13362 524 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 ZNF746Q6NUN9 644 aaPredicted RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLK4-206ENST00000520878 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 MBOAT7Q96N66 472 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 SLC38A10Q9HBR0 1119 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 LAMB1P07942 1786 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 DDNO94850 711 aaPredicted RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 TNNI1P19237 187 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 MCM3P25205 808 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 POLGP54098 1239 aaPredicted RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 PSMC5P62195 406 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 NLGN2Q8NFZ4 835 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 GLG1Q92896 1179 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 FNBP1Q96RU3 617 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 CHORDC1Q9UHD1 332 aaPredicted RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 BCRP11274 1271 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 RPS12P25398 132 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 MARK3P27448 753 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 PTGER2P43116 358 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 FMO5P49326 533 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 PGM5Q15124 567 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SLC18A3Q16572 532 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 DNAJC21Q5F1R6 531 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 TRIM31Q9BZY9 425 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 AGO4Q9HCK5 861 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 PCDHA10Q9Y5I2 948 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 MRPS9P82933 396 aaKnown RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 LMBRD2Q68DH5 695 aaPredicted RBP12.36□□□□□ -0.43
CLK4-206ENST00000520878 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 XXYLT1Q8NBI6 393 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 ASTN1O14525 1302 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 TUBB4BP68371 445 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 TRAPPC11Q7Z392 1133 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 KRT12Q99456 494 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SELENOOQ9BVL4 669 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SNX12Q9UMY4 172 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
CLK4-206ENST00000520878 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 RARRES1P49788 294 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 MXI1P50539 228 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 ESYT3A0FGR9 886 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 EVI5O60447 810 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 TLR2O60603 784 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 NOL4O94818 638 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 FERP16591 822 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 PTPRAP18433 802 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 LIG4P49917 911 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 MMP14P50281 582 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 VAMP7P51809 220 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 KRT76Q01546 638 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 ZNF571Q7Z3V5 609 aaPredicted RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 ELP3Q9H9T3 547 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 PXMP2Q9NR77 195 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 OLFML3Q9NRN5 406 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 HOXC10Q9NYD6 342 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 NF2P35240 595 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 STRN3Q13033 797 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 UGCGQ16739 394 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 LMBR1Q8WVP7 490 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 AP1M1Q9BXS5 423 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
CLK4-206ENST00000520878 BZW2Q9Y6E2 419 aaKnown RBP12.35□□□□□ -0.43
CLK4-206ENST00000520878 MYH8P13535 1937 aa12.34□□□□□ -0.43
CLK4-206ENST00000520878 PDE2AO00408 941 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms