RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 CKAP2LQ8IYA6 745 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 Q8N1Y9 231 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 TMEM145Q8NBT3 493 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 SYT8Q8NBV8 401 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 ST13P5Q8NFI4 369 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-216ENST00000520868 KCTD13Q8WZ19 329 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 SEC14L1Q92503 715 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
PABPC1-216ENST00000520868 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
PABPC1-216ENST00000520868 ZNF277Q9NRM2 450 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-216ENST00000520868 COA3Q9Y2R0 106 aaPredicted RBP7.68□□□□□ -1.18
PABPC1-216ENST00000520868 PMF1-BGLAPU3KQ54 211 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 CCDC88AQ3V6T2 1871 aa7.68□□□□□ -1.18
PABPC1-216ENST00000520868 A0A1W2PQU0 124 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CAPNS1P04632 268 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 SNRPA1P09661 255 aaKnown RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 U2AF1L5P0DN76 240 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 NPR1P16066 1061 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CTSWP56202 376 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 U2AF1Q01081 240 aaKnown RBP eCLIP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CACNB2Q08289 660 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 SF1Q15637 639 aaKnown RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 PRSS53Q2L4Q9 553 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 SLC35F1Q5T1Q4 408 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CLEC4GQ6UXB4 293 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CEP68Q76N32 757 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 TP53I13Q8NBR0 393 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 FEZF2Q8TBJ5 459 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 TMEM169Q96HH4 297 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CFAP53Q96M91 514 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 TAF1DQ9H5J8 278 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 MIS18AQ9NYP9 233 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 TMEFF2Q9UIK5 374 aaPredicted RBP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 NIP7Q9Y221 180 aaKnown RBP eCLIP7.67□□□□□ -1.18
PABPC1-216ENST00000520868 NUDCQ9Y266 331 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 ZNF652Q9Y2D9 606 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 X6R8D5 127 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 CEMIPQ8WUJ3 1361 aa7.67□□□□□ -1.18
PABPC1-216ENST00000520868 ANKRD31Q8N7Z5 1873 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 H7BY64 318 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 FOXN1O15353 648 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 BCL6P41182 706 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 LSAMPQ13449 338 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 HLFQ16534 295 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 SYNE4Q8N205 404 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 RCBTB1Q8NDN9 531 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 FNIP1Q8TF40 1166 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 C1orf159Q96HA4 380 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 PCDH18Q9HCL0 1135 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 LUC7LQ9NQ29 371 aaKnown RBP7.66□□□□□ -1.18
PABPC1-216ENST00000520868 HACL1Q9UJ83 578 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 ZNF541Q9H0D2 1346 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
PABPC1-216ENST00000520868 TIAM2Q8IVF5 1701 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 UBR2Q8IWV8 1755 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 DLEC1Q9Y238 1755 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 SLX4Q8IY92 1834 aa7.66□□□□□ -1.18
PABPC1-216ENST00000520868 KLRG2A4D1S0 409 aaPredicted RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 PLA2G1BP04054 148 aaKnown RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 ATP2B1P20020 1258 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 FPR2P25090 351 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 ALDH1B1P30837 517 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 EPHX2P34913 555 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 IARSP41252 1262 aaKnown RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 RTKN2Q8IZC4 609 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 ADGRG2Q8IZP9 1017 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 LRRC47Q8N1G4 583 aaKnown RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 ZNF669Q96BR6 464 aaPredicted RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 CHAMP1Q96JM3 812 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 PASKQ96RG2 1323 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 AARSD1Q9BTE6 412 aaKnown RBP7.65□□□□□ -1.18
PABPC1-216ENST00000520868 IER2Q9BTL4 223 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 KRTAP9-8Q9BYQ0 159 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 TANGO6Q9C0B7 1094 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 XYLT2Q9H1B5 865 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 SIT1Q9Y3P8 196 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 PCDHA2Q9Y5H9 948 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 NPFFR2Q9Y5X5 522 aa7.65□□□□□ -1.18
PABPC1-216ENST00000520868 FER1L6Q2WGJ9 1857 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 VIRMAQ69YN4 1812 aaKnown RBP7.64□□□□□ -1.19
PABPC1-216ENST00000520868 COL11A2P13942 1736 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-216ENST00000520868 CNTNAP1P78357 1384 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 NPC1L1Q9UHC9 1359 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 RNF123Q5XPI4 1314 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 A0A1B0GTL3 188 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 OTOL1A6NHN0 477 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-216ENST00000520868 ARNTLO00327 626 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 TCERG1O14776 1098 aaKnown RBP7.64□□□□□ -1.19
PABPC1-216ENST00000520868 FFAR3O14843 346 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 SGSM2O43147 1006 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 PPP2R1AP30153 589 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 GRIA2P42262 883 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
PABPC1-216ENST00000520868 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 SAPCD2Q86UD0 394 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 NLRP10Q86W26 655 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 SMARCC2Q8TAQ2 1214 aa7.64□□□□□ -1.19
PABPC1-216ENST00000520868 RRP7AQ9Y3A4 280 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms