RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 NOP58Q9Y2X3 529 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-212ENST00000520525 FOXS1O43638 330 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 CUTAO60888 179 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 ZNF623O75123 536 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 CYP17A1P05093 508 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 MMEP08473 750 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 IBSPP21815 317 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 PTX3P26022 381 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 FNTBP49356 437 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 SELENOPP49908 381 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 CDKN1CP49918 316 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 STILQ15468 1287 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 LHFPL2Q6ZUX7 228 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 C11orf74Q86VG3 221 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 PASD1Q8IV76 773 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 PALM2Q8IXS6 379 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 IFNL2Q8IZJ0 200 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 ASB15Q8WXK1 588 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 C16orf92Q96LL3 132 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 GBP4Q96PP9 640 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 LRRC37BQ96QE4 947 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 LMF1Q96S06 567 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 CARD11Q9BXL7 1154 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 TOMM22Q9NS69 142 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 ASB1Q9Y576 335 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 HS3ST3A1Q9Y663 406 aa4.45□□□□□ -1.7
TRAPPC13-212ENST00000520525 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 GPR39O43194 453 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 CDK11BP21127 795 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ETV4P43268 484 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 SMAD3P84022 425 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 KLF10Q13118 480 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 RNF151Q2KHN1 245 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ESRP1Q6NXG1 681 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 DPP8Q6V1X1 898 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 PRPF38AQ8NAV1 312 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 WDR66Q8TBY9 1149 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 NEIL1Q96FI4 390 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 CDK5RAP1Q96SZ6 601 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 AMNQ9BXJ7 453 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ZDHHC5Q9C0B5 715 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 DEF6Q9H4E7 631 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 INCENPQ9NQS7 918 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 GALNT8Q9NY28 637 aa4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 ING1Q9UK53 422 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-212ENST00000520525 PHLDB1Q86UU1 1377 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 PRAMEF22A3QJZ6 481 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 GOLGA6L22H0YM25 854 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 MATN2O00339 956 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 MUSKO15146 869 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 ULK1O75385 1050 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TGM1P22735 817 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 LSP1P33241 339 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 ADCY8P40145 1251 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 PHC1P78364 1004 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TMPRSS15P98073 1019 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 DUSP8Q13202 625 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 EPHA7Q15375 998 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TERF2Q15554 542 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TBR1Q16650 682 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 WDR72Q3MJ13 1102 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 SPDYAQ5MJ70 313 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 GPR158Q5T848 1215 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 RNF219Q5W0B1 726 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 KANK2Q63ZY3 851 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 LRSAM1Q6UWE0 723 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 LARP4Q71RC2 724 aaKnown RBP eCLIP4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 RTN4RL1Q86UN2 441 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TAX1BP1Q86VP1 789 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 SPATS2Q86XZ4 545 aaKnown RBP4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 ZZZ3Q8IYH5 903 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 HIPK4Q8NE63 616 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 ERCC4Q92889 916 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 SLC5A5Q92911 643 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 TCAF1Q9Y4C2 921 aa4.43□□□□□ -1.7
TRAPPC13-212ENST00000520525 RRADP55042 308 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 EVA1CP58658 441 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 ANAPC15P60006 121 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 IGBP1P78318 339 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 LRRC32Q14392 662 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 NOLC1Q14978 699 aaKnown RBP eCLIP4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 DDB1Q16531 1140 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 BROXQ5VW32 411 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 CXXC5Q7LFL8 322 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 NME9Q86XW9 330 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 RPUSD2Q8IZ73 545 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 FUKQ8N0W3 1084 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 ZNF610Q8N9Z0 462 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 CFHR4Q92496 578 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 RTF1Q92541 710 aaKnown RBP4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 BTBD2Q9BX70 525 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 KIAA1683Q9H0B3 1180 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 MS4A5Q9H3V2 200 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 UCKL1Q9NWZ5 548 aa4.42□□□□□ -1.7
TRAPPC13-212ENST00000520525 OAZ3Q9UMX2 235 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms