RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KLC1Q07866 573 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 STX18Q9P2W9 335 aaKnown RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 ZNF212Q9UDV6 495 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 CEP152O94986 1710 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TNS3Q68CZ2 1445 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 OCA2Q04671 838 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 UHMK1Q8TAS1 419 aaKnown RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 SYTL2Q9HCH5 934 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 CAPN11Q9UMQ6 739 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 PGRMC1O00264 195 aaKnown RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TRPA1O75762 1119 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 RAD17O75943 681 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 PYGBP11216 843 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 PTK2BQ14289 1009 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 DDX42Q86XP3 938 aaKnown RBP eCLIP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TAB3Q8N5C8 712 aaPredicted RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 MAGOHBQ96A72 148 aaKnown RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 SNX25Q9H3E2 840 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 H3BRJ5 948 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 KRT1P04264 644 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 Q4G0T1 1027 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TMEM179Q6ZVK1 233 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TRIM59Q8IWR1 403 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 C10orf88Q9H8K7 445 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 COG4Q9H9E3 785 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 LRRN2O75325 713 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 CYP2E1P05181 493 aaPredicted RBP12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 KRT4P19013 534 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 CDC25AP30304 524 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 GRIN1Q05586 938 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 STX19Q8N4C7 294 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 HIC2Q96JB3 615 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 TRAIPQ9BWF2 469 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 AP5M1Q9H0R1 490 aa12.95□□□□□ -0.34
ERGIC1-208ENST00000520399 ERCC6L2Q5T890 1561 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 SNAP25P60880 206 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 YWHAGP61981 247 aaKnown RBP eCLIP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 PDE1BQ01064 536 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 CTTNQ14247 550 aaKnown RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 SLC9A5Q14940 896 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 INO80B-WBP1J3KQ70 363 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 ECEL1O95672 775 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 PFKFB3Q16875 520 aaPredicted RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 INO80BQ9C086 356 aaPredicted RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 IL9RQ01113 521 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 SGO2Q562F6 1265 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 NFKBIL1Q9UBC1 381 aaPredicted RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 CPDO75976 1380 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 ATP5HO75947 161 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 EPB41L5Q9HCM4 733 aa12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 MRPL47Q9HD33 250 aaKnown RBP12.94□□□□□ -0.34
ERGIC1-208ENST00000520399 INHBAP08476 426 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 PPP1R18Q6NYC8 613 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 NDST4Q9H3R1 872 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 ESRRBO95718 433 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CHEK2O96017 543 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CYP2D6P10635 497 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 NR1D1P20393 614 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 PAX7P23759 505 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 NFKBIAP25963 317 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 THOC5Q13769 683 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 RCN2Q14257 317 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 SURF1Q15526 300 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 OR9Q1Q8NGQ5 310 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 TBC1D23Q9NUY8 699 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 SLC12A6Q9UHW9 1150 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 NDUFA10O95299 355 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 FTCDO95954 541 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 SLC4A1P02730 911 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CRKP46108 304 aa12.93□□□□□ -0.34
ERGIC1-208ENST00000520399 CCDC15Q0P6D6 951 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms