RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 RTKNQ9BST9 563 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 CHMP4BQ9H444 224 aaKnown RBP5.67□□□□□ -1.5
SDCBP-207ENST00000520168 ZFAND3Q9H8U3 227 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 ECHDC1Q9NTX5 307 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 DZANK1Q9NVP4 752 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 ANAPC4Q9UJX5 808 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 DUSP12Q9UNI6 340 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 CHD8Q9HCK8 2581 aa5.67□□□□□ -1.5
SDCBP-207ENST00000520168 FRMPD2Q68DX3 1309 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-207ENST00000520168 CACNA1GO43497 2377 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 CARNS1A5YM72 827 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 M0R2C6 588 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 SPTLC1O15269 473 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 KINO60870 393 aaKnown RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PPFIA3O75145 1194 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 EOMESO95936 686 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 F12P00748 615 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ADRB1P08588 477 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 FGRP09769 529 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 LAG3P18627 525 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 RFX1P22670 979 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 SP100P23497 879 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 CCND2P30279 289 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 HSD17B4P51659 736 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ARHGAP4P98171 946 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 LMNB2Q03252 620 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 KRT17Q04695 432 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 TBC1D8BQ0IIM8 1120 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 TRAF1Q13077 416 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PAK2Q13177 524 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 TDGQ13569 410 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PGM5Q15124 567 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 NONOQ15233 471 aaKnown RBP eCLIP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PAN2Q504Q3 1202 aaKnown RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ODR4Q5SWX8 454 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 C6orf118Q5T5N4 469 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 KIAA1841Q6NSI8 718 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 METTL7BQ6UX53 244 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 STOX1Q6ZVD7 989 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 VSIG10LQ86VR7 867 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 MRPS27Q92552 414 aaKnown RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PDCD2LQ9BRP1 358 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 LRRCC1Q9C099 1032 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 POMKQ9H5K3 350 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ENTPD7Q9NQZ7 604 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 CYP26B1Q9NR63 512 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 SETD4Q9NVD3 440 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 TMEM260Q9NX78 707 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 COL20A1Q9P218 1284 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 IGSF9Q9P2J2 1179 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 TUBE1Q9UJT0 475 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 DBR1Q9UK59 544 aaKnown RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 FBXL21Q9UKT6 434 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 CDV3Q9UKY7 258 aaKnown RBP5.66□□□□□ -1.5
SDCBP-207ENST00000520168 PCDHB7Q9Y5E2 793 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ZZEF1O43149 2961 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 ATRXP46100 2492 aa5.66□□□□□ -1.5
SDCBP-207ENST00000520168 MBLAC1A4D2B0 266 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 CFAP99D6REC4 459 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 CFBP00751 764 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ASGR2P07307 311 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 MYCLP12524 364 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 BMP2P12643 396 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 NPR3P17342 541 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 GRM5P41594 1212 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 SARSP49591 514 aaKnown RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ERVFC1P60507 584 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 MRPS6P82932 125 aaKnown RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 DMWDQ09019 674 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 GIT2Q14161 759 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 SMC1AQ14683 1233 aaKnown RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ACAP1Q15027 740 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 AGERQ15109 404 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ZNF528Q3MIS6 628 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ASPRV1Q53RT3 343 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 CCDC178Q5BJE1 867 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ATAT1Q5SQI0 421 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 PLPP4Q5VZY2 271 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 XRRA1Q6P2D8 792 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 OTOP3Q7RTS5 596 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 BPHLQ86WA6 291 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-207ENST00000520168 SIX5Q8N196 739 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 COLGALT1Q8NBJ5 622 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 RSPH1Q8WYR4 309 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ARID3AQ99856 593 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 SENP7Q9BQF6 1050 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 OSBPL7Q9BZF2 842 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 TOMM22Q9NS69 142 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 MAP10Q9P2G4 905 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 NCDNQ9UBB6 729 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 WNT16Q9UBV4 365 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 LIMD1Q9UGP4 676 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 CDY2AQ9Y6F7 541 aa5.65□□□□□ -1.5
SDCBP-207ENST00000520168 ZMYM6O95789 1325 aa5.65□□□□□ -1.51
SDCBP-207ENST00000520168 IGSF9BQ9UPX0 1349 aa5.65□□□□□ -1.51
SDCBP-207ENST00000520168 KDM3AQ9Y4C1 1321 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms