RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 ATP6V0A4Q9HBG4 840 aa18.39■□□□□ 0.53
IGHV3-62-201ENST00000520057 ERVK-5Q9HDB9 667 aa18.39■□□□□ 0.53
IGHV3-62-201ENST00000520057 STXBP5LQ9Y2K9 1186 aa18.39■□□□□ 0.53
IGHV3-62-201ENST00000520057 COL4A3BPQ9Y5P4 624 aa18.39■□□□□ 0.53
IGHV3-62-201ENST00000520057 BMP15O95972 392 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 SYT1P21579 422 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 IGFBP4P22692 258 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 RPA1P27694 616 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 PRPHP41219 470 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 DRP2Q13474 957 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 ZRSR1Q15695 479 aaKnown RBP18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 C4orf32Q8N8J7 132 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 ZNF579Q8NAF0 562 aaKnown RBP18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 SNX29Q8TEQ0 813 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 ARNTL2Q8WYA1 636 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 ADAM2Q99965 735 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 TSPYL2Q9H2G4 693 aaPredicted RBP18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 DHX33Q9H6R0 707 aaKnown RBP18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 C1orf112Q9NSG2 853 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 PCDHB7Q9Y5E2 793 aa18.38■□□□□ 0.53
IGHV3-62-201ENST00000520057 A0A087WWV3 80 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 A0A087WZ62 844 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 ARHGEF35A5YM69 484 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 ASAP2O43150 1006 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 MED24O75448 989 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 TAP1Q03518 808 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 TFDP1Q14186 410 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 PRPF31Q8WWY3 499 aaKnown RBP18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 FDXACB1Q9BRP7 624 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 MTUS1Q9ULD2 1270 aa18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 MYH9P35579 1960 aaKnown RBP18.37■□□□□ 0.53
IGHV3-62-201ENST00000520057 LCHNA4D1U4 455 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 VWA3AA6NCI4 1184 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 MUTP22033 750 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 RARRES1P49788 294 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 ATP2C1P98194 919 aaPredicted RBP18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 MXD4Q14582 209 aaPredicted RBP18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 NPAS4Q8IUM7 802 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 KSR1Q8IVT5 923 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 FIBCD1Q8N539 461 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 TGS1Q96RS0 853 aaKnown RBP18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
IGHV3-62-201ENST00000520057 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 STX6O43752 255 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 SARSP49591 514 aaKnown RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 NCBP1Q09161 790 aaKnown RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 LAMTOR4Q0VGL1 99 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 BTG3Q14201 252 aaPredicted RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 ARL6IP4Q66PJ3 421 aaKnown RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 MAEAQ7L5Y9 396 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 IGSF22Q8N9C0 903 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 RNF149Q8NC42 400 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 RASSF8Q8NHQ8 419 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 DBR1Q9UK59 544 aaKnown RBP18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 KIAA1024Q9UPX6 916 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 DNM3Q9UQ16 869 aa18.35■□□□□ 0.53
IGHV3-62-201ENST00000520057 LINC01553A4QN01 128 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 FGFR4P22455 802 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 PHKA2P46019 1235 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 FAM102BQ5T8I3 360 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 RTN4RL1Q86UN2 441 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 SPRYD3Q8NCJ5 442 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 MCPH1Q8NEM0 835 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 LINC01599Q8WXQ3 324 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 DDX19AQ9NUU7 478 aaKnown RBP18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 LAMA3Q16787 3333 aa18.34■□□□□ 0.53
IGHV3-62-201ENST00000520057 PDIA4P13667 645 aaKnown RBP18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 SF3A1Q15459 793 aaKnown RBP18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 TWF2Q6IBS0 349 aaKnown RBP18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 SRGAP1Q7Z6B7 1085 aa18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 SAMD11Q96NU1 681 aa18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 CHST12Q9NRB3 414 aa18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
IGHV3-62-201ENST00000520057 ADGRA3Q8IWK6 1321 aa18.32■□□□□ 0.52
IGHV3-62-201ENST00000520057 PP2D1A8MPX8 630 aa18.32■□□□□ 0.52
IGHV3-62-201ENST00000520057 MGEA5O60502 916 aa18.32■□□□□ 0.52
IGHV3-62-201ENST00000520057 ERLIN2O94905 339 aa18.32■□□□□ 0.52
IGHV3-62-201ENST00000520057 CDC25AP30304 524 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms