RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 PEX2P28328 305 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 TM4SF4P48230 202 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 CCT6BQ92526 530 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 QRSL1Q9H0R6 528 aaKnown RBP8.39□□□□□ -1.07
CLK4-202ENST00000519132 DNAJC28Q9NX36 388 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 WNK3Q9BYP7 1800 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 JAM2P57087 298 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 ELF2Q15723 593 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 TOR2AQ5JU69 321 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
CLK4-202ENST00000519132 TRMT2AQ8IZ69 625 aaKnown RBP8.39□□□□□ -1.07
CLK4-202ENST00000519132 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 NPLOC4Q8TAT6 608 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
CLK4-202ENST00000519132 PHACTR3Q96KR7 559 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 JCADQ9P266 1359 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 ADAMTS7Q9UKP4 1686 aa8.39□□□□□ -1.07
CLK4-202ENST00000519132 SLFN14P0C7P3 912 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 TDO2P48775 406 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 ATAT1Q5SQI0 421 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 C1orf229Q6ZS94 237 aaPredicted RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 IL16Q14005 1332 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 SNX2O60749 519 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 OFD1O75665 1012 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 ARMC3Q5W041 872 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 CCDC94Q9BW85 323 aaPredicted RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 SMC3Q9UQE7 1217 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 PRRT4C9JH25 899 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 SLITRK5O94991 958 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 CFBP00751 764 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 TYRP1P17643 537 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 PAK1Q13153 545 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 CDC37L1Q7L3B6 337 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 RBM12BQ8IXT5 1001 aaKnown RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 PAIP2Q9BPZ3 127 aaKnown RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 ANO3Q9BYT9 981 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 TOMM22Q9NS69 142 aa8.38□□□□□ -1.07
CLK4-202ENST00000519132 EVLQ9UI08 416 aaPredicted RBP8.38□□□□□ -1.07
CLK4-202ENST00000519132 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.37□□□□□ -1.07
CLK4-202ENST00000519132 WDR17Q8IZU2 1322 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 TCRBV5S4A2TA0A5A2 114 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 HSPA6P17066 643 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 SESN3P58005 492 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 SEC23AQ15436 765 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 CT83Q5H943 113 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 C1QTNF12Q5T7M4 302 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 LBX2Q6XYB7 198 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 OTOP3Q7RTS5 596 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 DYMQ7RTS9 669 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 RIPOR3Q96MK2 946 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 SMURF1Q9HCE7 757 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 C1orf112Q9NSG2 853 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 BTG4Q9NY30 223 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 SRPK3Q9UPE1 567 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 FHOD1Q9Y613 1164 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 CST3P01034 146 aaPredicted RBP8.37□□□□□ -1.07
CLK4-202ENST00000519132 POU2F2P09086 479 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 RIPK4P57078 832 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 PRR20EP86478 221 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 PRR20CP86479 221 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 PRR20DP86480 221 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 PRR20BP86481 221 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 PRR20AP86496 221 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
CLK4-202ENST00000519132 SLFN5Q08AF3 891 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 NEXNQ0ZGT2 675 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 LETMD1Q6P1Q0 360 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 MMS22LQ6ZRQ5 1243 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 LTV1Q96GA3 475 aaPredicted RBP8.37□□□□□ -1.07
CLK4-202ENST00000519132 FCRL3Q96P31 734 aaPredicted RBP8.37□□□□□ -1.07
CLK4-202ENST00000519132 PCDHGB2Q9Y5G2 931 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
CLK4-202ENST00000519132 TRIM75PA6NK02 468 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 WASH4PA8MWX3 477 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 TISP43B9A030 160 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 B9A039 149 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 M0R3H8 397 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 HTATSF1O43719 755 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 SMAD3P84022 425 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 SEMA5AQ13591 1074 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 SMAD2Q15796 467 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 CHRNA2Q15822 529 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 JAKMIP3Q5VZ66 844 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 FAM210AQ96ND0 272 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 VPS11Q9H270 941 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 SSU72Q9NP77 194 aaKnown RBP8.36□□□□□ -1.07
CLK4-202ENST00000519132 GJB4Q9NTQ9 266 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 CATSPERZQ9NTU4 200 aa8.36□□□□□ -1.07
CLK4-202ENST00000519132 DDX3XO00571 662 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLK4-202ENST00000519132 ULK1O75385 1050 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms