RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 ARHGAP6O43182 974 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 PRPF6O94906 941 aaKnown RBP4.48□□□□□ -1.69
PABPC1-209ENST00000519100 ADAM17P78536 824 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 ROM1Q03395 351 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 ADAM15Q13444 863 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 SAFB2Q14151 953 aaKnown RBP eCLIP4.48□□□□□ -1.69
PABPC1-209ENST00000519100 LRRC32Q14392 662 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 TCTN3Q6NUS6 607 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 AFAP1L2Q8N4X5 818 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 C8orf49Q96NF6 230 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 TUBGCP5Q96RT8 1024 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 AGO3Q9H9G7 860 aaKnown RBP4.48□□□□□ -1.69
PABPC1-209ENST00000519100 SEC61A2Q9H9S3 476 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.48□□□□□ -1.69
PABPC1-209ENST00000519100 TMPRSS11EQ9UL52 423 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 OAZ3Q9UMX2 235 aa4.48□□□□□ -1.69
PABPC1-209ENST00000519100 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-209ENST00000519100 A0A0A6YYJ9 748 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 C2orf78A6NCI8 922 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 KPNA1P52294 538 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-209ENST00000519100 PHC1P78364 1004 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 R3HDM1Q15032 1099 aaKnown RBP4.47□□□□□ -1.69
PABPC1-209ENST00000519100 SURF1Q15526 300 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 GPR158Q5T848 1215 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 KIAA1841Q6NSI8 718 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 LYSMD2Q8IV50 215 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 IFNL2Q8IZJ0 200 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 AHI1Q8N157 1196 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 OR14K1Q8NGZ2 314 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 OR2W6PQ8NHA6 318 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 Q8TCH9 128 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 SCYL1Q96KG9 808 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 LMF1Q96S06 567 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 OR10A2Q9H208 303 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 IFT57Q9NWB7 429 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.47□□□□□ -1.69
PABPC1-209ENST00000519100 SMPD4Q9NXE4 827 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 MSRAQ9UJ68 235 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 DENND2AQ9ULE3 1009 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 PPP2R3BQ9Y5P8 575 aa4.47□□□□□ -1.69
PABPC1-209ENST00000519100 NPEPPSL1A6NEC2 478 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 OPHN1O60890 802 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 EYA4O95677 639 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 PFKMP08237 780 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 VIL1P09327 827 aaKnown RBP4.46□□□□□ -1.7
PABPC1-209ENST00000519100 HNRNPLP14866 589 aaKnown RBP eCLIP4.46□□□□□ -1.7
PABPC1-209ENST00000519100 IL2P60568 153 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 ADCY2Q08462 1091 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 PDCD1Q15116 288 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 DHCR24Q15392 516 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 ZMAT1Q5H9K5 638 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 USP30Q70CQ3 517 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 TAX1BP1Q86VP1 789 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-209ENST00000519100 PHYKPLQ8IUZ5 450 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 SLC41A1Q8IVJ1 513 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 RTKN2Q8IZC4 609 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 FUKQ8N0W3 1084 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 TTC9BQ8N6N2 239 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 C7orf31Q8N865 590 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 ZNF610Q8N9Z0 462 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 LOXL4Q96JB6 756 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 SAMD11Q96NU1 681 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 MTG2Q9H4K7 406 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 VTA1Q9NP79 307 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 DNAI1Q9UI46 699 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 NR2E1Q9Y466 385 aa4.46□□□□□ -1.7
PABPC1-209ENST00000519100 PRSS38A1L453 326 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 APOL3O95236 402 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 ZNF20P17024 532 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 TNFRSF1AP19438 455 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 CR2P20023 1033 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 CD40P25942 277 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 SCNN1BP51168 640 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 MANFP55145 182 aaKnown RBP4.45□□□□□ -1.7
PABPC1-209ENST00000519100 ADCY1Q08828 1119 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 STRN3Q13033 797 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 DGKDQ16760 1214 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 BROXQ5VW32 411 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 GLB1LQ6UWU2 654 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 Q6ZSN1 163 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 BMP8AQ7Z5Y6 402 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 CLEC14AQ86T13 490 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 CXorf67Q86X51 503 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-209ENST00000519100 NME9Q86XW9 330 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 PIK3C3Q8NEB9 887 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 SLC5A5Q92911 643 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 GPHA2Q96T91 129 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 FDXACB1Q9BRP7 624 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-209ENST00000519100 PLA2G12BQ9BX93 195 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 C1QTNF3Q9BXJ4 246 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 POLR3BQ9NW08 1133 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-209ENST00000519100 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 HECAQ9UBI9 543 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-209ENST00000519100 RIMBP3CA6NJZ7 1639 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 RIMBP3BA6NNM3 1639 aa4.45□□□□□ -1.7
PABPC1-209ENST00000519100 RIMBP3Q9UFD9 1639 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms