RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 METTL22Q9BUU2 404 aaPredicted RBP5.78□□□□□ -1.48
CTNNA1-212ENST00000518919 SLC13A1Q9BZW2 595 aa5.78□□□□□ -1.48
CTNNA1-212ENST00000518919 MKNK2Q9HBH9 465 aa5.78□□□□□ -1.48
CTNNA1-212ENST00000518919 C14orf119Q9NWQ9 140 aa5.78□□□□□ -1.48
CTNNA1-212ENST00000518919 SALL3Q9BXA9 1300 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 SHANK3Q9BYB0 1731 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 PNMA6EA0A0J9YXQ4 647 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TMEM82A0PJX8 343 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF561-AS1K7EIQ3 104 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 CYP27B1O15528 508 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 PRPF3O43395 683 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 GNAI3P08754 354 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 YBX3P16989 372 aaKnown RBP eCLIP5.77□□□□□ -1.493e-10■□□□□ 9.1
CTNNA1-212ENST00000518919 EIF2S2P20042 333 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 RPL10P27635 214 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 RBM10P98175 930 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 IRF9Q00978 393 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 EGR3Q06889 387 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TCIRG1Q13488 830 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 BIRC2Q13490 618 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF174Q15697 407 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 BEND3Q5T5X7 828 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TTC22Q5TAA0 569 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 CXorf57Q6NSI4 855 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TMPRSS7Q7RTY8 843 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 CREG2Q8IUH2 290 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 C16orf71Q8IYS4 520 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 RAPGEF4Q8WZA2 1011 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TP53INP1Q96A56 240 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 TMEM169Q96HH4 297 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 FCRL2Q96LA5 508 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 OSBPL1AQ9BXW6 950 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 USP44Q9H0E7 712 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 PCIF1Q9H4Z3 704 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 ARNT2Q9HBZ2 717 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 LRRC4CQ9HCJ2 640 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 ERVK13-1Q9NX77 482 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 LRRFIP2Q9Y608 721 aaKnown RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 IBTKQ9P2D0 1353 aaPredicted RBP5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 PAPPAQ13219 1627 aa5.77□□□□□ -1.49
CTNNA1-212ENST00000518919 CACNA1FO60840 1977 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 H7BY64 318 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 WIPF1O43516 503 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 HMMRO75330 724 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 CFBP00751 764 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 PF4V1P10720 104 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 CHRNA4P43681 627 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 RECQLP46063 649 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 LACTBP83111 547 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 TEKQ02763 1124 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 SLC39A6Q13433 755 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 PCBP2Q15366 365 aaKnown RBP eCLIP5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 GPR19Q15760 415 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 INAVAQ3KP66 663 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 TMEM240Q5SV17 173 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 BROXQ5VW32 411 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 RNF43Q68DV7 783 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 KIAA1958Q8N8K9 716 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 C1orf162Q8NEQ5 155 aaPredicted RBP5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 DNAAF4Q8WXU2 420 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 RPS6KC1Q96S38 1066 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 JAM3Q9BX67 310 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 C22orf23Q9BZE7 217 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 UPF2Q9HAU5 1272 aaKnown RBP5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 SMURF1Q9HCE7 757 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 ATG3Q9NT62 314 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 MARCH2Q9P0N8 246 aa5.76□□□□□ -1.49
CTNNA1-212ENST00000518919 TNS2Q63HR2 1409 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 KCPQ6ZWJ8 1503 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 AHDC1Q5TGY3 1603 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TOGARAM1Q9Y4F4 1720 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PI4KAP2A4QPH2 592 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 VSTM5A8MXK1 200 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 FZD9O00144 591 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 KCNK3O14649 394 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TGM5O43548 720 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 HIP1RO75146 1068 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 UBTFL1P0CB47 393 aaPredicted RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 FPR2P25090 351 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 JAM2P57087 298 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 ATP8B2P98198 1209 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 SPIRE1Q08AE8 756 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 BRD3Q15059 726 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TERF2Q15554 542 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 HLA-DQA1Q5Y7H0 255 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PGM2L1Q6PCE3 622 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF790Q6PG37 636 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 KSR2Q6VAB6 950 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 EP400NLQ6ZTU2 488 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 CEP68Q76N32 757 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PTRH1Q86Y79 214 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TEX2Q8IWB9 1127 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TPH2Q8IWU9 490 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 AMOTL1Q8IY63 956 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 IFNL2Q8IZJ0 200 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 PI4KAP1Q8N8J0 262 aa5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
CTNNA1-212ENST00000518919 DBNDD2Q9BQY9 259 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms