RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 ZNF394Q53GI3 561 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 SPATA20Q8TB22 786 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 NELFBQ8WX92 580 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 OLFM3Q96PB7 478 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 EIF2AQ9BY44 585 aaKnown RBP18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 ETNK1Q9HBU6 452 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 TBC1D30Q9Y2I9 924 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 CD2APQ9Y5K6 639 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 MYPNQ86TC9 1320 aa18.7■□□□□ 0.58
LRRCC1-203ENST00000517875 O00370 1275 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 ACTN4O43707 911 aaKnown RBP18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 SUN1O94901 812 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 ASMTLO95671 621 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 IFIT1P09914 478 aaKnown RBP18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 RASA1P20936 1047 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 IGHMBP2P38935 993 aaKnown RBP18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 MEA1Q16626 185 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 NAT14Q8WUY8 206 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 TAF4BQ92750 862 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 CELF1Q92879 486 aaKnown RBP18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 ZNF711Q9Y462 761 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 RTL9Q8NET4 1388 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 H0Y3Z8 333 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 UNC5CO95185 931 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 GNAT2P19087 354 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 HALP42357 657 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 RTP1P59025 263 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 CYP4X1Q8N118 509 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 ZMAT2Q96NC0 199 aaKnown RBP18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 ISCUQ9H1K1 167 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 VPS16Q9H269 839 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 RNF14Q9UBS8 474 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 HEY1Q9Y5J3 304 aa18.69■□□□□ 0.58
LRRCC1-203ENST00000517875 VAV1P15498 845 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 ECHS1P30084 290 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 ADORA1P30542 326 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 COPB1P53618 953 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 HLTFQ14527 1009 aaKnown RBP eCLIP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 METTL24Q5JXM2 366 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 PHLDB3Q6NSJ2 640 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 KANK3Q6NY19 840 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 FITM2Q8N6M3 262 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 LSM14AQ8ND56 463 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 FAM13CQ8NE31 585 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 DPH5Q9H2P9 285 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 NRDE2Q9H7Z3 1164 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 TIMM22Q9Y584 194 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 LMNAP02545 664 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 CD44P16070 742 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 SERPINB3P29508 390 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 RNASELQ05823 741 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 WASHC2DQ5SRD0 308 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 ILDR2Q71H61 639 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 RBM46Q8TBY0 533 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 UBLCP1Q8WVY7 318 aaPredicted RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 MPP4Q96JB8 637 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 HNRNPABQ99729 332 aaKnown RBP18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 DCLRE1BQ9H816 532 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 RIC1Q4ADV7 1423 aa18.68■□□□□ 0.58
LRRCC1-203ENST00000517875 LAMB2P55268 1798 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 SH2B2O14492 632 aaPredicted RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 LYNP07948 512 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 VDRP11473 427 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 MMP13P45452 471 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 CDK7P50613 346 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 RPS8P62241 208 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 CAMK2BQ13554 666 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 TTF1Q15361 905 aaPredicted RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 INAQ16352 499 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 STOX1Q6ZVD7 989 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 DIS3LQ8TF46 1054 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 SERTAD1Q9UHV2 236 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 BTBD19C9JJ37 291 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 GJB6O95452 261 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 GSTT2P0CG29 244 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 GSTT2BP0CG30 244 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 FLT3P36888 993 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 RASSF7Q02833 373 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 R3HDM1Q15032 1099 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 C3orf62Q6ZUJ4 267 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 GRAMD1CQ8IYS0 662 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 SREK1Q8WXA9 508 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 SCG3Q8WXD2 468 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 PRMT1Q99873 361 aaKnown RBP18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 TAF1P21675 1872 aa18.67■□□□□ 0.58
LRRCC1-203ENST00000517875 MAGEB3O15480 346 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 TIMM44O43615 452 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 EXOSC10Q01780 885 aaKnown RBP18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 MECOMQ03112 1051 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 CUL1Q13616 776 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 FAAH2Q6GMR7 532 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 AGGF1Q8N302 714 aaeCLIP18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 ANKK1Q8NFD2 765 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 LRRC8CQ8TDW0 803 aa18.66■□□□□ 0.58
LRRCC1-203ENST00000517875 NACC2Q96BF6 587 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms