RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 TTBK2Q6IQ55 1244 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 PRCCQ92733 491 aaPredicted RBP13.4□□□□□ -0.26
PCM1-203ENST00000517545 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 DHX36Q9H2U1 1008 aaKnown RBP13.4□□□□□ -0.26
PCM1-203ENST00000517545 ZNF287Q9HBT7 754 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 DBR1Q9UK59 544 aaKnown RBP13.4□□□□□ -0.26
PCM1-203ENST00000517545 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 PCDHB13Q9Y5F0 798 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 CCDC169A6NNP5 214 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 GSTA1P08263 222 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 KRT13P13646 458 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 SLC16A2P36021 539 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCM1-203ENST00000517545 PLS1Q14651 629 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 LRRC14Q15048 493 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 TAS2R14Q9NYV8 317 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 TRAF3IP3Q9Y228 551 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 KDM3AQ9Y4C1 1321 aa13.4□□□□□ -0.26
PCM1-203ENST00000517545 RSPH10B2B2RC85 870 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 RSPH10BP0C881 870 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 CLK2P49760 499 aaKnown RBP13.39□□□□□ -0.27
PCM1-203ENST00000517545 NPEPPSP55786 919 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 PPATQ06203 517 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 AFF2P51816 1311 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 A8MUI8 341 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 GIT2Q14161 759 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 RSRC1Q96IZ7 334 aaKnown RBP13.39□□□□□ -0.27
PCM1-203ENST00000517545 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 REEP2Q9BRK0 252 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
PCM1-203ENST00000517545 KCNMB3Q9NPA1 279 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 RARAP10276 462 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 RPL21P46778 160 aaKnown RBP13.39□□□□□ -0.27
PCM1-203ENST00000517545 ALDH5A1P51649 535 aaPredicted RBP13.39□□□□□ -0.27
PCM1-203ENST00000517545 NCALDP61601 193 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 MAPK7Q13164 816 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 SPDYCQ5MJ68 293 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 THAP2Q9H0W7 228 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 COG5Q9UP83 839 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
PCM1-203ENST00000517545 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CLGNO14967 610 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 NR3C1P04150 777 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 ZDHHC14Q8IZN3 488 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 HOOK2Q96ED9 719 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 ASTN1O14525 1302 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 GOLGA6L10A0A0M3HER8 536 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CREB1P16220 341 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 MARCKSL1P49006 195 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 OTUD6AQ7L8S5 288 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 SPICE1Q8N0Z3 855 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 MLXIPLQ9NP71 852 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 NCANO14594 1321 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 SNX3O60493 162 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 PLCG2P16885 1265 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 STAT1P42224 750 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 GSTO1P78417 241 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 RIPK1Q13546 671 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 ZNF268Q14587 947 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 CNGA2Q16280 664 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 TTC27Q6P3X3 843 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 KRT35Q92764 455 aa13.38□□□□□ -0.27
PCM1-203ENST00000517545 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
PCM1-203ENST00000517545 CARD9Q9H257 536 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms