RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MAGEC3Q8TD91 643 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TATDN2Q93075 761 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CENPTQ96BT3 561 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 MIEF2Q96C03 454 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CELF4Q9BZC1 486 aaKnown RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CARD9Q9H257 536 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CPVLQ9H3G5 476 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 GGA1Q9UJY5 639 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM94Q12767 1356 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 NRXN3Q9Y4C0 1643 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 A0A0A6YYK5 440 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 ESYT2A0FGR8 921 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 FAM170AA1A519 330 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 ANP32DO95626 131 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM253P0C7T8 217 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 COPS2P61201 443 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 CYP4A11Q02928 519 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 DRAP1Q14919 205 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 BTNL9Q6UXG8 535 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SLC35G2Q8TBE7 412 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TRIM11Q96F44 468 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 AIPL1Q9NZN9 384 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TBK1Q9UHD2 729 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 MCM8Q9UJA3 840 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 KAT6BQ8WYB5 2073 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 C1orf167Q5SNV9 1468 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 USP17L5A8MUK1 530 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SNX1Q13596 522 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 LRRC14Q15048 493 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 RNF207Q6ZRF8 634 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 APLFQ8IW19 511 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 PROCA1Q8NCQ7 364 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 FAM167BQ9BTA0 163 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 OSBPL1AQ9BXW6 950 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 IMPG2Q9BZV3 1241 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 VCX3BQ9H321 246 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 VCX3AQ9NNX9 186 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 UBE2TQ9NPD8 197 aaPredicted RBP7.17□□□□□ -1.26
CPNE3-203ENST00000517490 RIC1Q4ADV7 1423 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 PITPNM2Q9BZ72 1349 aa7.17□□□□□ -1.26
CPNE3-203ENST00000517490 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 POTEB3A0JP26 581 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 POTECB2RU33 542 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 IGF2BP3O00425 579 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MEIS1O00470 390 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 GAS7O60861 476 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ACTN1P12814 892 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 PDE6BP35913 854 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SIK1P57059 783 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 COBLL1Q53SF7 1204 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ODR4Q5SWX8 454 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 POTEBQ6S5H4 581 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 PPM1KQ8N3J5 372 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 NEDD1Q8NHV4 660 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ANKRD27Q96NW4 1050 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 PACSIN1Q9BY11 444 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 KANSL2Q9H9L4 492 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 PARVGQ9HBI0 331 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MAD2L2Q9UI95 211 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 GRIN2DO15399 1336 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 EXOC1LA0A1B0GW35 172 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CCDC160A6NGH7 325 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 POC1B-GALNT4F8VUJ3 575 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CAND2O75155 1236 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 LCA5LO95447 670 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 FGFR4P22455 802 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MAPK4P31152 587 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RAD23BP54727 409 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MAP7Q14244 749 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 IL17AQ16552 155 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CRELD2Q6UXH1 353 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 KCNV2Q8TDN2 545 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 STK33Q9BYT3 514 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 TTYH3Q9C0H2 523 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RASA4BC9J798 803 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 K7ENM7 598 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 O00370 1275 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RASA4O43374 803 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SLC9A1P19634 815 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 GSCP56915 257 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ADCY1Q08828 1119 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 AP3B2Q13367 1082 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SLC29A2Q14542 456 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MFSD14BQ5SR56 506 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 LGSNQ5TDP6 509 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ZNF449Q6P9G9 518 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CLEC4GQ6UXB4 293 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms